DBTMEE
Database of Transcriptome in Mouse Early Embryos


Gene Search:

DBTMEE:2004548
GeneChd8
SynonymsDuplin
Descriptionchromodomain helicase DNA binding protein 8
LocusNM_201637 UCSC: chr14:52817826-52857247(-) OLP: chr14:52817826-52857247(-)
DB links


Entrez 67772
MGI 1915022
Ensembl ENSMUSG00000053754
Vega OTTMUSG00000023392
Featureprotein-coding
GO_BP
  •   16 Terms
      in utero embryonic development (GO:0001701)
      ATP catabolic process (GO:0006200)
      transcription, DNA-templated (GO:0006351)
      regulation of transcription, DNA-templated (GO:0006355)
      Wnt signaling pathway (GO:0016055)
      chromatin modification (GO:0016568)
      negative regulation of Wnt signaling pathway (GO:0030178)
      DNA duplex unwinding (GO:0032508)
      ATP-dependent chromatin remodeling (GO:0043044)
      negative regulation of apoptotic process (GO:0043066)
      negative regulation of transcription, DNA-templated (GO:0045892)
      positive regulation of transcription, DNA-templated (GO:0045893)
      positive regulation of transcription from RNA polymerase II promoter (GO:0045944)
      positive regulation of transcription from RNA polymerase III promoter (GO:0045945)
      canonical Wnt signaling pathway (GO:0060070)
      negative regulation of fibroblast apoptotic process (GO:2000270)
GO_MF
GO_CC
KEGG
  •   1 Terms
Ver2_FPKM
DBTMEEGeneRefSeqEntrezSPR_FPKMOo_FPKM1C_FPKM2C_FPKM4C_FPKMESC_FPKMMEF_FPKMp1C_FPKMp4C_FPKMiPSC_FPKM
2004548
(v2.0)		Chd8NM_20163767772
9.1779420.498727.650623.989912.548610.019515.466527.597712.224110.4499
SPR_Histone_Erkek_5KaroundTSS
DBTMEEGeneEntrezH3.3_1_ChIP/InputH3.3_1(Enrich; log2)H3.3_2_ChIP/InputH3.3_2(Enrich; log2)H3K4me3_1_ChIP/InputH3K4me3_1(Enrich; log2)H3K4me3_2_ChIP/InputH3K4me3_2(Enrich; log2)H3K27me3_1_ChIP/InputH3K27me3_1(Enrich; log2)H3K27me3_2_ChIP/InputH3K27me3_2(Enrich; log2)
2004548
(v2.0)		Chd867772
543/3760.0174399/376-0.030514/376-1.092520/376-2.84069/376-3.190858/376-3.2626
SPR_Histone_Erkek_2KaroundTSS
DBTMEEGeneEntrezH3.3_1_ChIP/InputH3.3_1(Enrich; log2)H3.3_2_ChIP/InputH3.3_2(Enrich; log2)H3K4me3_1_ChIP/InputH3K4me3_1(Enrich; log2)H3K4me3_2_ChIP/InputH3K4me3_2(Enrich; log2)H3K27me3_1_ChIP/InputH3K27me3_1(Enrich; log2)H3K27me3_2_ChIP/InputH3K27me3_2(Enrich; log2)
2004548
(v2.0)		Chd867772
245/1690.0228176/169-0.05737/169-0.899911/169-2.5061/169-4.378230/169-3.0308
SPR_Methy_Kobayashi_5KaroundTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level
2004548
(v2.0)		Chd867772
68.25767196.14
SPR_Methy_Kobayashi_2KaroundTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level
2004548
(v2.0)		Chd867772
21.5472393.68
SOLiD_OocyteTo4C_FPKM_gene_guided N/A
SOLiD_Illumina_Oo_1C_Sperm_FPKM_gene_guided N/A
SOLiD_Partheno1C_FPKM_gene_guided N/A
SOLiD_Illumina_Oo_p1C_Sperm_FPKM_gene_guided N/A
SOLiD_Partheno4C_FPKM_gene_guided N/A
Illumina_Oo_2C_FPKM_gene_guided N/A
SOLiD_SC_Oo_REPLICA_FPKM_gene_guided N/A
NIA60mer N/A
MOE430 N/A
Agilent44K N/A
Proteome N/A