DBTMEE
Database of Transcriptome in Mouse Early Embryos


Gene Search:

DBTMEE:2004860
GeneCnot1
Synonyms
DescriptionCCR4-NOT transcription complex, subunit 1
LocusNM_001205226 UCSC: chr8:98243351-98331362(-) OLP: chr8:98243351-98331362(-)
NM_178078 UCSC: chr8:98243351-98331362(-) OLP: chr8:98243351-98331362(-)
NM_153164 UCSC: chr8:98243351-98331362(-) OLP: chr8:98243351-98331362(-)
DB links


Entrez 234594
MGI 2442402
Ensembl ENSMUSG00000036550
Featureprotein-coding
GO_BP
  •   14 Terms
      negative regulation of transcription from RNA polymerase II promoter (GO:0000122)
      trophectodermal cell differentiation (GO:0001829)
      transcription, DNA-templated (GO:0006351)
      regulation of transcription, DNA-templated (GO:0006355)
      regulation of translation (GO:0006417)
      multicellular organismal development (GO:0007275)
      positive regulation of cytoplasmic mRNA processing body assembly (GO:0010606)
      gene silencing by RNA (GO:0031047)
      negative regulation of intracellular estrogen receptor signaling pathway (GO:0033147)
      negative regulation of retinoic acid receptor signaling pathway (GO:0048387)
      positive regulation of nuclear-transcribed mRNA poly(A) tail shortening (GO:0060213)
      RNA phosphodiester bond hydrolysis, exonucleolytic (GO:0090503)
      positive regulation of nuclear-transcribed mRNA catabolic process, deadenylation-dependent decay (GO:1900153)
      regulation of stem cell maintenance (GO:2000036)
GO_MF
GO_CC
KEGG
  •   1 Terms
Ver2_FPKM
DBTMEEGeneRefSeqEntrezSPR_FPKMOo_FPKM1C_FPKM2C_FPKM4C_FPKMESC_FPKMMEF_FPKMp1C_FPKMp4C_FPKMiPSC_FPKM
2004860
(v2.0)		Cnot1NM_001205226,NM_153164,NM_178078234594
22.100928.69720.583670.856586.473242.910220.425619.216386.598628.1197
SPR_Histone_Erkek_5KaroundTSS
DBTMEEGeneEntrezH3.3_1_ChIP/InputH3.3_1(Enrich; log2)H3.3_2_ChIP/InputH3.3_2(Enrich; log2)H3K4me3_1_ChIP/InputH3K4me3_1(Enrich; log2)H3K4me3_2_ChIP/InputH3K4me3_2(Enrich; log2)H3K27me3_1_ChIP/InputH3K27me3_1(Enrich; log2)H3K27me3_2_ChIP/InputH3K27me3_2(Enrich; log2)
2004860
(v2.0)		Cnot1234594
750/4670.1703449/467-0.1725165/4672.0718430/4671.207816/467-2.7348226/467-1.6399
SPR_Histone_Erkek_2KaroundTSS
DBTMEEGeneEntrezH3.3_1_ChIP/InputH3.3_1(Enrich; log2)H3.3_2_ChIP/InputH3.3_2(Enrich; log2)H3K4me3_1_ChIP/InputH3K4me3_1(Enrich; log2)H3K4me3_2_ChIP/InputH3K4me3_2(Enrich; log2)H3K27me3_1_ChIP/InputH3K27me3_1(Enrich; log2)H3K27me3_2_ChIP/InputH3K27me3_2(Enrich; log2)
2004860
(v2.0)		Cnot1234594
428/2160.4719215/216-0.1223148/2162.9865369/2162.09114/216-3.402757/216-2.4902
SPR_Methy_Kobayashi_5KaroundTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level
2004860
(v2.0)		Cnot1234594
50.322115831.85
SPR_Methy_Kobayashi_2KaroundTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level
2004860
(v2.0)		Cnot1234594
13.370711811.33
SOLiD_OocyteTo4C_FPKM_gene_guided N/A
SOLiD_Illumina_Oo_1C_Sperm_FPKM_gene_guided N/A
SOLiD_Partheno1C_FPKM_gene_guided N/A
SOLiD_Illumina_Oo_p1C_Sperm_FPKM_gene_guided N/A
SOLiD_Partheno4C_FPKM_gene_guided N/A
Illumina_Oo_2C_FPKM_gene_guided N/A
SOLiD_SC_Oo_REPLICA_FPKM_gene_guided N/A
NIA60mer N/A
MOE430 N/A
Agilent44K N/A
Proteome N/A