DBTMEE
Database of Transcriptome in Mouse Early Embryos


Gene Search:

DBTMEE:2004863
GeneCnot2
Synonyms
DescriptionCCR4-NOT transcription complex, subunit 2
LocusNR_024327 UCSC: chr10:115922217-116018567(-) OLP: chr10:115922217-116018567(-)
NM_001037847 UCSC: chr10:115922217-116018567(-) OLP: chr10:115922217-116018567(-)
NM_028082 UCSC: chr10:115922217-116018567(-) OLP: chr10:115922217-116018567(-)
NM_001037846 UCSC: chr10:115922217-116018567(-) OLP: chr10:115922217-116018567(-)
NM_001037848 UCSC: chr10:115946847-116018567(-) OLP: chr10:115946847-116018567(-)
DB links


Entrez 72068
MGI 1919318
Ensembl ENSMUSG00000020166
Vega OTTMUSG00000035217
Featureprotein-coding
GO_BP
  •   11 Terms
      negative regulation of transcription from RNA polymerase II promoter (GO:0000122)
      trophectodermal cell differentiation (GO:0001829)
      transcription, DNA-templated (GO:0006351)
      regulation of transcription, DNA-templated (GO:0006355)
      regulation of translation (GO:0006417)
      multicellular organismal development (GO:0007275)
      positive regulation of cytoplasmic mRNA processing body assembly (GO:0010606)
      gene silencing by RNA (GO:0031047)
      negative regulation of intracellular estrogen receptor signaling pathway (GO:0033147)
      RNA phosphodiester bond hydrolysis, exonucleolytic (GO:0090503)
      regulation of stem cell maintenance (GO:2000036)
GO_MF
  •   2 Terms
      RNA polymerase II transcription corepressor binding (GO:0001226)
      poly(A)-specific ribonuclease activity (GO:0004535)
GO_CC
KEGG
  •   1 Terms
Ver2_FPKM
DBTMEEGeneRefSeqEntrezSPR_FPKMOo_FPKM1C_FPKM2C_FPKM4C_FPKMESC_FPKMMEF_FPKMp1C_FPKMp4C_FPKMiPSC_FPKM
2004863
(v2.0)		Cnot2NM_001037846,NM_001037847,NM_001037848,NM_028082,NR_02432772068
13.158366.202117.83649.615466.00130.158322.888897.392451.583433.3206
SPR_Histone_Erkek_5KaroundTSS
DBTMEEGeneEntrezH3.3_1_ChIP/InputH3.3_1(Enrich; log2)H3.3_2_ChIP/InputH3.3_2(Enrich; log2)H3K4me3_1_ChIP/InputH3K4me3_1(Enrich; log2)H3K4me3_2_ChIP/InputH3K4me3_2(Enrich; log2)H3K27me3_1_ChIP/InputH3K27me3_1(Enrich; log2)H3K27me3_2_ChIP/InputH3K27me3_2(Enrich; log2)
2004863
(v2.0)		Cnot272068
680/3580.4118483/3580.3151161/3582.409430/3581.588911/358-2.8577118/358-2.1861
SPR_Histone_Erkek_2KaroundTSS
DBTMEEGeneEntrezH3.3_1_ChIP/InputH3.3_1(Enrich; log2)H3.3_2_ChIP/InputH3.3_2(Enrich; log2)H3K4me3_1_ChIP/InputH3K4me3_1(Enrich; log2)H3K4me3_2_ChIP/InputH3K4me3_2(Enrich; log2)H3K27me3_1_ChIP/InputH3K27me3_1(Enrich; log2)H3K27me3_2_ChIP/InputH3K27me3_2(Enrich; log2)
2004863
(v2.0)		Cnot272068
409/1421.0083257/1420.7356152/1423.5904413/1422.84973/142-3.133770/142-1.599
SPR_Methy_Kobayashi_5KaroundTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level
2004863
(v2.0)		Cnot272068
62.763114842.41
SPR_Methy_Kobayashi_2KaroundTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level
2004863
(v2.0)		Cnot272068
13.97139614.55
SOLiD_OocyteTo4C_FPKM_gene_guided N/A
SOLiD_Illumina_Oo_1C_Sperm_FPKM_gene_guided N/A
SOLiD_Partheno1C_FPKM_gene_guided N/A
SOLiD_Illumina_Oo_p1C_Sperm_FPKM_gene_guided N/A
SOLiD_Partheno4C_FPKM_gene_guided N/A
Illumina_Oo_2C_FPKM_gene_guided N/A
SOLiD_SC_Oo_REPLICA_FPKM_gene_guided N/A
NIA60mer
DBTMEEArray_Feature_NumberOligo_Parent_CloneUnigeneGeneEntrezU_ClusterNAP_ClusterGene_U/NAPTIGRSwissProtESTOo1C2C4C8CMorulaBlastocyst
0004936
(v1.0)		7226H3044F02-3Cnot272068
U032242NAP093715-001Cnot2;TC891845,TC891837Q9D0P1U,F,23.65563.58033.73893.57664.23373.93214.1797
0004936
(v1.0)		8088H3059F07-3Mm.22533Cnot272068
U032242NAP037560-1Cnot2;TC891846Q9D0P1U,F,22.79032.66572.64582.54372.90272.70312.7278
0004936
(v1.0)		9081H3076C02-3Mm.22533Cnot272068
U032242NAP107838-1Cnot2;TC891841Q9D0P1U,F,23.98114.30874.62424.34083.85314.22723.9621
MOE430 N/A
Agilent44K N/A
Proteome N/A