DBTMEE
Database of Transcriptome in Mouse Early Embryos


Gene Search:

DBTMEE:2004866
GeneCnot6
Synonyms
DescriptionCCR4-NOT transcription complex, subunit 6
LocusNM_001290741 UCSC: chr11:49484999-49516156(-) OLP: chr11:49484999-49516156(-)
NM_212484 UCSC: chr11:49484999-49526224(-) OLP: chr11:49484999-49526224(-)
DB links


Entrez 104625
MGI 2144529
Ensembl ENSMUSG00000020362
Vega OTTMUSG00000005565
Featureprotein-coding
GO_BP
  •   10 Terms
      transcription, DNA-templated (GO:0006351)
      regulation of transcription, DNA-templated (GO:0006355)
      regulation of translation (GO:0006417)
      positive regulation of cell proliferation (GO:0008284)
      positive regulation of cytoplasmic mRNA processing body assembly (GO:0010606)
      gene silencing by RNA (GO:0031047)
      exonucleolytic nuclear-transcribed mRNA catabolic process involved in deadenylation-dependent decay (GO:0043928)
      nuclear-transcribed mRNA catabolic process, no-go decay (GO:0070966)
      RNA phosphodiester bond hydrolysis, exonucleolytic (GO:0090503)
      positive regulation of ligand-dependent nuclear receptor transcription coactivator activity (GO:2000327)
GO_MF
GO_CC
KEGG
  •   1 Terms
Ver2_FPKM
DBTMEEGeneRefSeqEntrezSPR_FPKMOo_FPKM1C_FPKM2C_FPKM4C_FPKMESC_FPKMMEF_FPKMp1C_FPKMp4C_FPKMiPSC_FPKM
2004866
(v2.0)		Cnot6NM_001290741,NM_212484104625
8.828719.8234118.230714.395616.841513.506639.337412.385313.30710.4321
SPR_Histone_Erkek_5KaroundTSS
DBTMEEGeneEntrezH3.3_1_ChIP/InputH3.3_1(Enrich; log2)H3.3_2_ChIP/InputH3.3_2(Enrich; log2)H3K4me3_1_ChIP/InputH3K4me3_1(Enrich; log2)H3K4me3_2_ChIP/InputH3K4me3_2(Enrich; log2)H3K27me3_1_ChIP/InputH3K27me3_1(Enrich; log2)H3K27me3_2_ChIP/InputH3K27me3_2(Enrich; log2)
2004866
(v2.0)		Cnot6104625
699/3880.3356403/388-0.0613111/3881.7641230/3880.573848/388-0.9428324/388-0.8564
SPR_Histone_Erkek_2KaroundTSS
DBTMEEGeneEntrezH3.3_1_ChIP/InputH3.3_1(Enrich; log2)H3.3_2_ChIP/InputH3.3_2(Enrich; log2)H3K4me3_1_ChIP/InputH3K4me3_1(Enrich; log2)H3K4me3_2_ChIP/InputH3K4me3_2(Enrich; log2)H3K27me3_1_ChIP/InputH3K27me3_1(Enrich; log2)H3K27me3_2_ChIP/InputH3K27me3_2(Enrich; log2)
2004866
(v2.0)		Cnot6104625
391/1670.7111180/167-0.008103/1672.8166210/1671.647124/167-0.7176147/167-0.7772
SPR_Methy_Kobayashi_5KaroundTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level
2004866
(v2.0)		Cnot6104625
75.634217543.22
SPR_Methy_Kobayashi_2KaroundTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level
2004866
(v2.0)		Cnot6104625
29.577712623.47
SOLiD_OocyteTo4C_FPKM_gene_guided N/A
SOLiD_Illumina_Oo_1C_Sperm_FPKM_gene_guided N/A
SOLiD_Partheno1C_FPKM_gene_guided N/A
SOLiD_Illumina_Oo_p1C_Sperm_FPKM_gene_guided N/A
SOLiD_Partheno4C_FPKM_gene_guided N/A
Illumina_Oo_2C_FPKM_gene_guided N/A
SOLiD_SC_Oo_REPLICA_FPKM_gene_guided N/A
NIA60mer N/A
MOE430 N/A
Agilent44K N/A
Proteome N/A