DBTMEE
Database of Transcriptome in Mouse Early Embryos


Gene Search:

DBTMEE:2005189
GeneCsde1
SynonymsD3Jfr1
unr
Descriptioncold shock domain containing E1, RNA binding
LocusNM_144901 UCSC: chr3:102824469-102862112(+) OLP: chr3:102824469-102862112(+)
NM_001161854 UCSC: chr3:102824469-102862112(+) OLP: chr3:102824469-102862112(+)
DB links


Entrez 229663
MGI 92356
Ensembl ENSMUSG00000068823
Featureprotein-coding
GO_BP
  •   2 Terms
      regulation of transcription, DNA-templated (GO:0006355)
      nuclear-transcribed mRNA catabolic process, no-go decay (GO:0070966)
GO_MF
GO_CC
KEGG
Ver2_FPKM
DBTMEEGeneRefSeqEntrezSPR_FPKMOo_FPKM1C_FPKM2C_FPKM4C_FPKMESC_FPKMMEF_FPKMp1C_FPKMp4C_FPKMiPSC_FPKM
2005189
(v2.0)		Csde1NM_001161854,NM_144901229663
94.7459134.993246.4226.384332.213106.35194.2496198.657297.569113.948
SPR_Histone_Erkek_5KaroundTSS
DBTMEEGeneEntrezH3.3_1_ChIP/InputH3.3_1(Enrich; log2)H3.3_2_ChIP/InputH3.3_2(Enrich; log2)H3K4me3_1_ChIP/InputH3K4me3_1(Enrich; log2)H3K4me3_2_ChIP/InputH3K4me3_2(Enrich; log2)H3K27me3_1_ChIP/InputH3K27me3_1(Enrich; log2)H3K27me3_2_ChIP/InputH3K27me3_2(Enrich; log2)
2005189
(v2.0)		Csde1229663
572/3530.183408/3530.0924272/3533.1815569/3532.012316/353-2.3352104/353-2.3457
SPR_Histone_Erkek_2KaroundTSS
DBTMEEGeneEntrezH3.3_1_ChIP/InputH3.3_1(Enrich; log2)H3.3_2_ChIP/InputH3.3_2(Enrich; log2)H3K4me3_1_ChIP/InputH3K4me3_1(Enrich; log2)H3K4me3_2_ChIP/InputH3K4me3_2(Enrich; log2)H3K27me3_1_ChIP/InputH3K27me3_1(Enrich; log2)H3K27me3_2_ChIP/InputH3K27me3_2(Enrich; log2)
2005189
(v2.0)		Csde1229663
335/1610.5415211/1610.2724262/1614.2042540/1613.05756/161-2.502643/161-2.463
SPR_Methy_Kobayashi_5KaroundTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level
2005189
(v2.0)		Csde1229663
32.611111628.11
SPR_Methy_Kobayashi_2KaroundTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level
2005189
(v2.0)		Csde1229663
12.70659313.66
SOLiD_OocyteTo4C_FPKM_gene_guided N/A
SOLiD_Illumina_Oo_1C_Sperm_FPKM_gene_guided N/A
SOLiD_Partheno1C_FPKM_gene_guided N/A
SOLiD_Illumina_Oo_p1C_Sperm_FPKM_gene_guided N/A
SOLiD_Partheno4C_FPKM_gene_guided N/A
Illumina_Oo_2C_FPKM_gene_guided N/A
SOLiD_SC_Oo_REPLICA_FPKM_gene_guided N/A
NIA60mer N/A
MOE430 N/A
Agilent44K N/A
Proteome N/A