DBTMEE
Database of Transcriptome in Mouse Early Embryos


Gene Search:

DBTMEE:2005212
GeneCsnk1a1
SynonymsCK1a
Descriptioncasein kinase 1, alpha 1
LocusNM_146087 UCSC: chr18:61715236-61747953(+) OLP: chr18:61715236-61747953(+)
DB links


Entrez 93687
MGI 1934950
Ensembl ENSMUSG00000024576
Vega OTTMUSG00000035876
Featureprotein-coding
GO_BP
GO_MF
GO_CC
KEGG
  •   2 Terms
Ver2_FPKM
Log10 (FPKM+1)
1.854
SPR
2.153
Oo
2.471
1C
2.289
2C
2.116
4C
1.87
ESC
2.127
MEF
2.366
p1C
2.088
p4C
1.832
iPSC
DBTMEEGeneRefSeqEntrezSPR_FPKMOo_FPKM1C_FPKM2C_FPKM4C_FPKMESC_FPKMMEF_FPKMp1C_FPKMp4C_FPKMiPSC_FPKM
2005212
(v2.0)		Csnk1a1NM_14608793687
70.5172141.302295.065193.561129.75973.1039132.932231.481121.51166.9611
SPR_Histone_Erkek_5KaroundTSS
Enrichment of Histone Variant and Modification (+/- 5Kb from TSS)
0.443
H3.3
Rep.1
0.239
H3.3
Rep.2
2.75
H3K4me3
Rep.1
2.207
H3K4me3
Rep.2
0.567
H3K27me3
Rep.1
0.244
H3K27me3
Rep.2
DBTMEEGeneEntrezH3.3_1_ChIP/InputH3.3_1(Enrich; log2)H3.3_2_ChIP/InputH3.3_2(Enrich; log2)H3K4me3_1_ChIP/InputH3K4me3_1(Enrich; log2)H3K4me3_2_ChIP/InputH3K4me3_2(Enrich; log2)H3K27me3_1_ChIP/InputH3K27me3_1(Enrich; log2)H3K27me3_2_ChIP/InputH3K27me3_2(Enrich; log2)
2005212
(v2.0)		Csnk1a193687
652/3360.4425430/3360.239192/3362.75620/3362.2067120/3360.5666603/3360.2437
SPR_Histone_Erkek_2KaroundTSS
Enrichment of Histone Variant and Modification (+/- 2Kb from TSS)
0.663
H3.3
Rep.1
0.279
H3.3
Rep.2
3.724
H3K4me3
Rep.1
3.212
H3K4me3
Rep.2
-0.302
H3K27me3
Rep.1
-1.097
H3K27me3
Rep.2
DBTMEEGeneEntrezH3.3_1_ChIP/InputH3.3_1(Enrich; log2)H3.3_2_ChIP/InputH3.3_2(Enrich; log2)H3K4me3_1_ChIP/InputH3K4me3_1(Enrich; log2)H3K4me3_2_ChIP/InputH3K4me3_2(Enrich; log2)H3K27me3_1_ChIP/InputH3K27me3_1(Enrich; log2)H3K27me3_2_ChIP/InputH3K27me3_2(Enrich; log2)
2005212
(v2.0)		Csnk1a193687
351/1550.663204/1550.2785181/1553.724579/1553.211830/155-0.3024109/155-1.0967
SPR_Methy_Kobayashi_5KaroundTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level
2005212
(v2.0)		Csnk1a193687
54.072419028.46
SPR_Methy_Kobayashi_2KaroundTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level
2005212
(v2.0)		Csnk1a193687
10.6971377.81
SOLiD_OocyteTo4C_FPKM_gene_guided N/A
SOLiD_Illumina_Oo_1C_Sperm_FPKM_gene_guided N/A
SOLiD_Partheno1C_FPKM_gene_guided N/A
SOLiD_Illumina_Oo_p1C_Sperm_FPKM_gene_guided N/A
SOLiD_Partheno4C_FPKM_gene_guided N/A
Illumina_Oo_2C_FPKM_gene_guided N/A
SOLiD_SC_Oo_REPLICA_FPKM_gene_guided N/A
NIA60mer
DBTMEEArray_Feature_NumberOligo_Parent_CloneUnigeneGeneEntrezU_ClusterNAP_ClusterGene_U/NAPTIGRSwissProtESTOo1C2C4C8CMorulaBlastocyst
0005276
(v1.0)		11225H3110B12-3Mm.43737Csnk1a193687
U043677NAP056960-1Csnk1a1;TC874298,TC874296Q64506U,F,22.19722.41342.55912.72262.4262.50912.6207
MOE430 N/A
Agilent44K N/A
Proteome N/A