| Gene | Ctbp2 |
| Synonyms | D7Ertd45e
Gtrgeo6
Ribeye |
| Description | C-terminal binding protein 2 |
| Locus | NM_001170744 UCSC: chr7:140178694-140206930(-) OLP: chr7:140178694-140206930(-)
NM_009980 UCSC: chr7:140178694-140315166(-) OLP: chr7:140178694-140315166(-)
|
| DB links |
Entrez 13017
MGI 1201686
Ensembl ENSMUSG00000030970
Vega OTTMUSG00000036726
|
| Feature | protein-coding |
| GO_BP |
-
 7 Terms
|
| GO_MF |
-
5 Terms
|
| GO_CC |
-
4 Terms
|
| KEGG |
-
4 Terms
|
| Ver2_FPKM |
| DBTMEE | Gene | RefSeq | Entrez | SPR_FPKM | Oo_FPKM | 1C_FPKM | 2C_FPKM | 4C_FPKM | ESC_FPKM | MEF_FPKM | p1C_FPKM | p4C_FPKM | iPSC_FPKM |
|---|
2005253
(v2.0) | Ctbp2 | NM_001170744,NM_009980 | 13017
| 16.6207 | 139.361 | 213.684 | 11.4838 | 12.3405 | 36.6449 | 12.1109 | 186.713 | 15.3825 | 41.438 |
|
| SPR_Histone_Erkek_5KaroundTSS |
Enrichment of Histone Variant and Modification (+/- 5Kb from TSS)
| DBTMEE | Gene | Entrez | H3.3_1_ChIP/Input | H3.3_1(Enrich; log2) | H3.3_2_ChIP/Input | H3.3_2(Enrich; log2) | H3K4me3_1_ChIP/Input | H3K4me3_1(Enrich; log2) | H3K4me3_2_ChIP/Input | H3K4me3_2(Enrich; log2) | H3K27me3_1_ChIP/Input | H3K27me3_1(Enrich; log2) | H3K27me3_2_ChIP/Input | H3K27me3_2(Enrich; log2) |
|---|
2005253
(v2.0) | Ctbp2 | 13017
| 752/537 | -0.027 | 404/537 | -0.5256 | 13/537 | -1.6926 | 48/537 | -2.1295 | 79/537 | -0.7002 | 775/537 | -0.0699 |
|
| SPR_Histone_Erkek_2KaroundTSS |
Enrichment of Histone Variant and Modification (+/- 2Kb from TSS)
| DBTMEE | Gene | Entrez | H3.3_1_ChIP/Input | H3.3_1(Enrich; log2) | H3.3_2_ChIP/Input | H3.3_2(Enrich; log2) | H3K4me3_1_ChIP/Input | H3K4me3_1(Enrich; log2) | H3K4me3_2_ChIP/Input | H3K4me3_2(Enrich; log2) | H3K27me3_1_ChIP/Input | H3K27me3_1(Enrich; log2) | H3K27me3_2_ChIP/Input | H3K27me3_2(Enrich; log2) |
|---|
2005253
(v2.0) | Ctbp2 | 13017
| 329/228 | 0.0162 | 145/228 | -0.7648 | 8/228 | -1.1367 | 24/228 | -1.8736 | 27/228 | -0.9939 | 298/228 | -0.2121 |
|
| SPR_Methy_Kobayashi_5KaroundTSS |
| DBTMEE | Gene | Entrez | Total_mC_levels | Number_of_mCs | Averaged_Methylation_level |
|---|
2005253
(v2.0) | Ctbp2 | 13017
| 144.521 | 149 | 96.99 |
|
| SPR_Methy_Kobayashi_2KaroundTSS |
| DBTMEE | Gene | Entrez | Total_mC_levels | Number_of_mCs | Averaged_Methylation_level |
|---|
2005253
(v2.0) | Ctbp2 | 13017
| 66.0131 | 67 | 98.53 |
|
| SOLiD_OocyteTo4C_FPKM_gene_guided |
N/A |
| SOLiD_Illumina_Oo_1C_Sperm_FPKM_gene_guided |
N/A |
| SOLiD_Partheno1C_FPKM_gene_guided |
N/A |
| SOLiD_Illumina_Oo_p1C_Sperm_FPKM_gene_guided |
N/A |
| SOLiD_Partheno4C_FPKM_gene_guided |
N/A |
| Illumina_Oo_2C_FPKM_gene_guided |
N/A |
| SOLiD_SC_Oo_REPLICA_FPKM_gene_guided |
N/A |
| NIA60mer |
| DBTMEE | Array_Feature_Number | Oligo_Parent_Clone | Unigene | Gene | Entrez | U_Cluster | NAP_Cluster | Gene_U/NAP | TIGR | SwissProt | EST | Oo | 1C | 2C | 4C | 8C | Morula | Blastocyst |
|---|
0005317
(v1.0) | 557 | C0117F02-3 | Mm.10172 | Ctbp2 | 13017
| U029363 | NAP122803-1 | Ctbp2; | TC808923,TC808908 | P56546 | U,F | 3.8451 | 3.7 | 3.1507 | 3.0135 | 3.1263 | 3.3738 | 3.4306 |
0005317
(v1.0) | 12528 | H3145F03-3 | Mm.10172 | Ctbp2 | 13017
| U019639 | NAP022624-001 | | | | | 3.1649 | 3.0491 | 2.6853 | 2.6961 | 2.229 | 2.3163 | 2.2409 |
0005317
(v1.0) | 13398 | J0033B01-3 | Mm.10172 | Ctbp2 | 13017
| U008875 | NAP122219-001 | Ctbp2; | | | U,F | 2.9851 | 3.0221 | 3.2025 | 3.0557 | 3.0928 | 3.1675 | 3.0553 |
0005317
(v1.0) | 17820 | L0021A12-3 | Mm.10172 | Ctbp2 | 13017
| U029362 | NAP122796-1 | | TC808908 | P56546 | U,F,2 | 4.207 | 3.8234 | 2.7794 | 3.0228 | 3.4622 | 3.513 | 3.8394 |
0005317
(v1.0) | 20080 | L0519E01-3 | Mm.10172 | Ctbp2 | 13017
| U042872 | NAP056709-1 | | | | U,F,2 | 2.7693 | 2.5971 | 2.5373 | 2.8155 | 3.0387 | 2.9105 | 2.9628 |
|
| MOE430 |
N/A |
| Agilent44K |
N/A |
| Proteome |
N/A |
