DBTMEE
Database of Transcriptome in Mouse Early Embryos


Gene Search:

DBTMEE:2005729
GeneDda1
Synonyms
DescriptionDET1 and DDB1 associated 1
LocusNM_025600 UCSC: chr8:73993093-74000334(+) OLP: chr8:73993093-74000334(+)
DB links


Entrez 66498
MGI 1913748
Ensembl ENSMUSG00000074247
Vega OTTMUSG00000032855
Featureprotein-coding
GO_BP
GO_MF
GO_CC
KEGG
Ver2_FPKM
Log10 (FPKM+1)
1.551
SPR
1.654
Oo
1.699
1C
1.639
2C
1.448
4C
1.2
ESC
1.387
MEF
1.966
p1C
1.398
p4C
1.214
iPSC
DBTMEEGeneRefSeqEntrezSPR_FPKMOo_FPKM1C_FPKM2C_FPKM4C_FPKMESC_FPKMMEF_FPKMp1C_FPKMp4C_FPKMiPSC_FPKM
2005729
(v2.0)		Dda1NM_02560066498
34.603244.109849.036742.50427.067414.8523.387191.572824.011315.3826
SPR_Histone_Erkek_5KaroundTSS
Enrichment of Histone Variant and Modification (+/- 5Kb from TSS)
0.086
H3.3
Rep.1
-0.341
H3.3
Rep.2
4.192
H3K4me3
Rep.1
3.382
H3K4me3
Rep.2
-2.915
H3K27me3
Rep.1
-2.407
H3K27me3
Rep.2
DBTMEEGeneEntrezH3.3_1_ChIP/InputH3.3_1(Enrich; log2)H3.3_2_ChIP/InputH3.3_2(Enrich; log2)H3K4me3_1_ChIP/InputH3K4me3_1(Enrich; log2)H3K4me3_2_ChIP/InputH3K4me3_2(Enrich; log2)H3K27me3_1_ChIP/InputH3K27me3_1(Enrich; log2)H3K27me3_2_ChIP/InputH3K27me3_2(Enrich; log2)
2005729
(v2.0)		Dda166498
850/5610.0865480/561-0.3405862/5614.19162333/5613.381617/561-2.9148159/561-2.4072
SPR_Histone_Erkek_2KaroundTSS
Enrichment of Histone Variant and Modification (+/- 2Kb from TSS)
0.35
H3.3
Rep.1
-0.021
H3.3
Rep.2
5.07
H3K4me3
Rep.1
4.209
H3K4me3
Rep.2
-2.073
H3K27me3
Rep.1
-2.073
H3K27me3
Rep.2
DBTMEEGeneEntrezH3.3_1_ChIP/InputH3.3_1(Enrich; log2)H3.3_2_ChIP/InputH3.3_2(Enrich; log2)H3K4me3_1_ChIP/InputH3K4me3_1(Enrich; log2)H3K4me3_2_ChIP/InputH3K4me3_2(Enrich; log2)H3K27me3_1_ChIP/InputH3K27me3_1(Enrich; log2)H3K27me3_2_ChIP/InputH3K27me3_2(Enrich; log2)
2005729
(v2.0)		Dda166498
375/2060.3499220/206-0.0212603/2065.07041532/2064.209411/206-2.072673/206-2.0734
SPR_Methy_Kobayashi_5KaroundTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level
2005729
(v2.0)		Dda166498
59.994616137.26
SPR_Methy_Kobayashi_2KaroundTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level
2005729
(v2.0)		Dda166498
19.41315833.47
SOLiD_OocyteTo4C_FPKM_gene_guided N/A
SOLiD_Illumina_Oo_1C_Sperm_FPKM_gene_guided N/A
SOLiD_Partheno1C_FPKM_gene_guided N/A
SOLiD_Illumina_Oo_p1C_Sperm_FPKM_gene_guided N/A
SOLiD_Partheno4C_FPKM_gene_guided N/A
Illumina_Oo_2C_FPKM_gene_guided N/A
SOLiD_SC_Oo_REPLICA_FPKM_gene_guided N/A
NIA60mer N/A
MOE430 N/A
Agilent44K N/A
Proteome N/A