DBTMEE
Database of Transcriptome in Mouse Early Embryos


Gene Search:

DBTMEE:2005776
GeneDdx5
SynonymsHlr1
p68
DescriptionDEAD (Asp-Glu-Ala-Asp) box polypeptide 5
LocusNM_007840 UCSC: chr11:106641670-106649808(-) OLP: chr11:106641670-106649808(-)
DB links


Entrez 13207
MGI 105037
Ensembl ENSMUSG00000020719
Vega OTTMUSG00000003589
Featureprotein-coding
GO_BP
  •   18 Terms
      negative regulation of transcription from RNA polymerase II promoter (GO:0000122)
      regulation of alternative mRNA splicing, via spliceosome (GO:0000381)
      in utero embryonic development (GO:0001701)
      ATP catabolic process (GO:0006200)
      transcription, DNA-templated (GO:0006351)
      regulation of transcription, DNA-templated (GO:0006355)
      mRNA processing (GO:0006397)
      circadian rhythm (GO:0007623)
      RNA splicing (GO:0008380)
      positive regulation of intracellular estrogen receptor signaling pathway (GO:0033148)
      positive regulation of DNA damage response, signal transduction by p53 class mediator (GO:0043517)
      regulation of viral genome replication (GO:0045069)
      regulation of osteoblast differentiation (GO:0045667)
      positive regulation of transcription, DNA-templated (GO:0045893)
      positive regulation of transcription from RNA polymerase II promoter (GO:0045944)
      regulation of androgen receptor signaling pathway (GO:0060765)
      intrinsic apoptotic signaling pathway by p53 class mediator (GO:0072332)
      regulation of skeletal muscle cell differentiation (GO:2001014)
GO_MF
GO_CC
KEGG
Ver2_FPKM
DBTMEEGeneRefSeqEntrezSPR_FPKMOo_FPKM1C_FPKM2C_FPKM4C_FPKMESC_FPKMMEF_FPKMp1C_FPKMp4C_FPKMiPSC_FPKM
2005776
(v2.0)		Ddx5NM_007840,NR_03722413207
3626.68111.519153.074125.23705.435288.216433.6275.6575300.826295.236
SPR_Histone_Erkek_5KaroundTSS
DBTMEEGeneEntrezH3.3_1_ChIP/InputH3.3_1(Enrich; log2)H3.3_2_ChIP/InputH3.3_2(Enrich; log2)H3K4me3_1_ChIP/InputH3K4me3_1(Enrich; log2)H3K4me3_2_ChIP/InputH3K4me3_2(Enrich; log2)H3K27me3_1_ChIP/InputH3K27me3_1(Enrich; log2)H3K27me3_2_ChIP/InputH3K27me3_2(Enrich; log2)
2005776
(v2.0)		Ddx513207
756/3830.4672411/383-0.0144771/3834.56733066/3834.323215/383-2.53986/383-2.7329
SPR_Histone_Erkek_2KaroundTSS
DBTMEEGeneEntrezH3.3_1_ChIP/InputH3.3_1(Enrich; log2)H3.3_2_ChIP/InputH3.3_2(Enrich; log2)H3K4me3_1_ChIP/InputH3K4me3_1(Enrich; log2)H3K4me3_2_ChIP/InputH3K4me3_2(Enrich; log2)H3K27me3_1_ChIP/InputH3K27me3_1(Enrich; log2)H3K27me3_2_ChIP/InputH3K27me3_2(Enrich; log2)
2005776
(v2.0)		Ddx513207
449/1750.8429190/1750.0024594/1755.26991770/1754.64986/175-2.6244/175-2.5505
SPR_Methy_Kobayashi_5KaroundTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level
2005776
(v2.0)		Ddx513207
54.442623123.57
SPR_Methy_Kobayashi_2KaroundTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level
2005776
(v2.0)		Ddx513207
14.32361897.58
SOLiD_OocyteTo4C_FPKM_gene_guided N/A
SOLiD_Illumina_Oo_1C_Sperm_FPKM_gene_guided N/A
SOLiD_Partheno1C_FPKM_gene_guided N/A
SOLiD_Illumina_Oo_p1C_Sperm_FPKM_gene_guided N/A
SOLiD_Partheno4C_FPKM_gene_guided N/A
Illumina_Oo_2C_FPKM_gene_guided N/A
SOLiD_SC_Oo_REPLICA_FPKM_gene_guided N/A
NIA60mer
DBTMEEArray_Feature_NumberOligo_Parent_CloneUnigeneGeneEntrezU_ClusterNAP_ClusterGene_U/NAPTIGRSwissProtESTOo1C2C4C8CMorulaBlastocyst
0005851
(v1.0)		18541L0213B07-3Ddx513207
Ddx53.64063.63713.8874.47754.27244.34684.3654
MOE430 N/A
Agilent44K N/A
Proteome N/A