DBTMEE
Database of Transcriptome in Mouse Early Embryos


Gene Search:

DBTMEE:2006418
GeneEchs1
Synonyms
Descriptionenoyl Coenzyme A hydratase, short chain, 1, mitochondrial
LocusNM_053119 UCSC: chr7:147291622-147302322(-) OLP: chr7:147291622-147302322(-)
DB links


Entrez 93747
MGI 2136460
Ensembl ENSMUSG00000025465
Vega OTTMUSG00000027297
Featureprotein-coding
GO_BP
GO_MF
GO_CC
KEGG
Ver2_FPKM
Log10 (FPKM+1)
1.722
SPR
1.605
Oo
1.887
1C
1.041
2C
0.782
4C
1.765
ESC
1.473
MEF
1.77
p1C
0.856
p4C
1.754
iPSC
DBTMEEGeneRefSeqEntrezSPR_FPKMOo_FPKM1C_FPKM2C_FPKM4C_FPKMESC_FPKMMEF_FPKMp1C_FPKMp4C_FPKMiPSC_FPKM
2006418
(v2.0)		Echs1NM_05311993747
51.711139.310776.01299.985515.0540457.23828.729257.88236.1765255.736
SPR_Histone_Erkek_5KaroundTSS
Enrichment of Histone Variant and Modification (+/- 5Kb from TSS)
-0.087
H3.3
Rep.1
-0.26
H3.3
Rep.2
1.026
H3K4me3
Rep.1
0.502
H3K4me3
Rep.2
0.602
H3K27me3
Rep.1
0.276
H3K27me3
Rep.2
DBTMEEGeneEntrezH3.3_1_ChIP/InputH3.3_1(Enrich; log2)H3.3_2_ChIP/InputH3.3_2(Enrich; log2)H3K4me3_1_ChIP/InputH3K4me3_1(Enrich; log2)H3K4me3_2_ChIP/InputH3K4me3_2(Enrich; log2)H3K27me3_1_ChIP/InputH3K27me3_1(Enrich; log2)H3K27me3_2_ChIP/InputH3K27me3_2(Enrich; log2)
2006418
(v2.0)		Echs193747
536/399-0.0867361/399-0.259968/3991.0261225/3990.5021146/3990.6022732/3990.2755
SPR_Histone_Erkek_2KaroundTSS
Enrichment of Histone Variant and Modification (+/- 2Kb from TSS)
0.037
H3.3
Rep.1
-0.205
H3.3
Rep.2
1.985
H3K4me3
Rep.1
1.512
H3K4me3
Rep.2
1.125
H3K27me3
Rep.1
0.777
H3K27me3
Rep.2
DBTMEEGeneEntrezH3.3_1_ChIP/InputH3.3_1(Enrich; log2)H3.3_2_ChIP/InputH3.3_2(Enrich; log2)H3K4me3_1_ChIP/InputH3K4me3_1(Enrich; log2)H3K4me3_2_ChIP/InputH3K4me3_2(Enrich; log2)H3K27me3_1_ChIP/InputH3K27me3_1(Enrich; log2)H3K27me3_2_ChIP/InputH3K27me3_2(Enrich; log2)
2006418
(v2.0)		Echs193747
265/1810.037170/181-0.205462/1811.9849207/1811.51296/1811.125471/1810.7771
SPR_Methy_Kobayashi_5KaroundTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level
2006418
(v2.0)		Echs193747
57.211811052.01
SPR_Methy_Kobayashi_2KaroundTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level
2006418
(v2.0)		Echs193747
15.84086624
SOLiD_OocyteTo4C_FPKM_gene_guided N/A
SOLiD_Illumina_Oo_1C_Sperm_FPKM_gene_guided N/A
SOLiD_Partheno1C_FPKM_gene_guided N/A
SOLiD_Illumina_Oo_p1C_Sperm_FPKM_gene_guided N/A
SOLiD_Partheno4C_FPKM_gene_guided N/A
Illumina_Oo_2C_FPKM_gene_guided N/A
SOLiD_SC_Oo_REPLICA_FPKM_gene_guided N/A
NIA60mer
DBTMEEArray_Feature_NumberOligo_Parent_CloneUnigeneGeneEntrezU_ClusterNAP_ClusterGene_U/NAPTIGRSwissProtESTOo1C2C4C8CMorulaBlastocyst
0006489
(v1.0)		7395H3047D05-3Echs193747
U029420NAP006417-001Echs1;TC868896,TC868893,TC868892Q99LX73.33333.4253.04432.90583.06933.13363.3028
MOE430 N/A
Agilent44K N/A
Proteome N/A