DBTMEE
Database of Transcriptome in Mouse Early Embryos


Gene Search:

DBTMEE:2006587
GeneElf2
SynonymsNERF-2
DescriptionE74-like factor 2
LocusNM_001291063 UCSC: chr3:51056642-51081436(-) OLP: chr3:51056642-51081436(-)
NM_023502 UCSC: chr3:51056642-51144566(-) OLP: chr3:51056642-51144566(-)
NM_001291062 UCSC: chr3:51056642-51081436(-) OLP: chr3:51056642-51081436(-)
NM_001291059 UCSC: chr3:51056642-51144566(-) OLP: chr3:51056642-51144566(-)
DB links


Entrez 69257
MGI 1916507
Ensembl ENSMUSG00000037174
Vega OTTMUSG00000021235
Featureprotein-coding
GO_BP
  •   7 Terms
      transcription, DNA-templated (GO:0006351)
      regulation of transcription, DNA-templated (GO:0006355)
      regulation of transcription from RNA polymerase II promoter (GO:0006357)
      transcription from RNA polymerase II promoter (GO:0006366)
      cell differentiation (GO:0030154)
      negative regulation of transcription, DNA-templated (GO:0045892)
      positive regulation of transcription, DNA-templated (GO:0045893)
GO_MF
  •   5 Terms
      sequence-specific DNA binding RNA polymerase II transcription factor activity (GO:0000981)
      DNA binding (GO:0003677)
      sequence-specific DNA binding transcription factor activity (GO:0003700)
      protein binding (GO:0005515)
      sequence-specific DNA binding (GO:0043565)
GO_CC
KEGG
Ver2_FPKM
Log10 (FPKM+1)
1.043
SPR
1.266
Oo
1.457
1C
0.922
2C
0.985
4C
0.899
ESC
1.096
MEF
1.401
p1C
0.868
p4C
0.89
iPSC
DBTMEEGeneRefSeqEntrezSPR_FPKMOo_FPKM1C_FPKM2C_FPKM4C_FPKMESC_FPKMMEF_FPKMp1C_FPKMp4C_FPKMiPSC_FPKM
2006587
(v2.0)		Elf2NM_001291059,NM_001291062,NM_001291063,NM_02350269257
10.036117.438527.627.357488.665666.9330711.470224.17066.379316.7706
SPR_Histone_Erkek_5KaroundTSS
Enrichment of Histone Variant and Modification (+/- 5Kb from TSS)
-0.023
H3.3
Rep.1
-0.157
H3.3
Rep.2
-1.136
H3K4me3
Rep.1
-1.347
H3K4me3
Rep.2
-2.558
H3K27me3
Rep.1
-2.455
H3K27me3
Rep.2
DBTMEEGeneEntrezH3.3_1_ChIP/InputH3.3_1(Enrich; log2)H3.3_2_ChIP/InputH3.3_2(Enrich; log2)H3K4me3_1_ChIP/InputH3K4me3_1(Enrich; log2)H3K4me3_2_ChIP/InputH3K4me3_2(Enrich; log2)H3K27me3_1_ChIP/InputH3K27me3_1(Enrich; log2)H3K27me3_2_ChIP/InputH3K27me3_2(Enrich; log2)
2006587
(v2.0)		Elf269257
545/388-0.0226377/388-0.157314/388-1.136460/388-1.347215/388-2.5575106/388-2.4546
SPR_Histone_Erkek_2KaroundTSS
Enrichment of Histone Variant and Modification (+/- 2Kb from TSS)
0.364
H3.3
Rep.1
0.41
H3.3
Rep.2
-1.698
H3K4me3
Rep.1
-1.431
H3K4me3
Rep.2
-2.726
H3K27me3
Rep.1
-2.667
H3K27me3
Rep.2
DBTMEEGeneEntrezH3.3_1_ChIP/InputH3.3_1(Enrich; log2)H3.3_2_ChIP/InputH3.3_2(Enrich; log2)H3K4me3_1_ChIP/InputH3K4me3_1(Enrich; log2)H3K4me3_2_ChIP/InputH3K4me3_2(Enrich; log2)H3K27me3_1_ChIP/InputH3K27me3_1(Enrich; log2)H3K27me3_2_ChIP/InputH3K27me3_2(Enrich; log2)
2006587
(v2.0)		Elf269257
195/1060.3636153/1060.40992/106-1.698315/106-1.43053/106-2.725724/106-2.6675
SPR_Methy_Kobayashi_5KaroundTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level
2006587
(v2.0)		Elf269257
124.1313095.48
SPR_Methy_Kobayashi_2KaroundTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level
2006587
(v2.0)		Elf269257
23.21142592.85
SOLiD_OocyteTo4C_FPKM_gene_guided N/A
SOLiD_Illumina_Oo_1C_Sperm_FPKM_gene_guided N/A
SOLiD_Partheno1C_FPKM_gene_guided N/A
SOLiD_Illumina_Oo_p1C_Sperm_FPKM_gene_guided N/A
SOLiD_Partheno4C_FPKM_gene_guided N/A
Illumina_Oo_2C_FPKM_gene_guided N/A
SOLiD_SC_Oo_REPLICA_FPKM_gene_guided N/A
NIA60mer N/A
MOE430 N/A
Agilent44K N/A
Proteome N/A