DBTMEE
Database of Transcriptome in Mouse Early Embryos


Gene Search:

DBTMEE:2006842
GeneEtf1
SynonymsERF1
SUP45L1
TB3-1
Descriptioneukaryotic translation termination factor 1
LocusNM_144866 UCSC: chr18:35062439-35091657(-) OLP: chr18:35062439-35091657(-)
DB links


Entrez 225363
MGI 2385071
Ensembl ENSMUSG00000024360
Vega OTTMUSG00000042433
Featureprotein-coding
GO_BP
GO_MF
  •   3 Terms
GO_CC
KEGG
  •   1 Terms
Ver2_FPKM
Log10 (FPKM+1)
1.637
SPR
1.735
Oo
2.014
1C
2.442
2C
2.514
4C
1.951
ESC
1.698
MEF
1.867
p1C
2.438
p4C
2.012
iPSC
DBTMEEGeneRefSeqEntrezSPR_FPKMOo_FPKM1C_FPKM2C_FPKM4C_FPKMESC_FPKMMEF_FPKMp1C_FPKMp4C_FPKMiPSC_FPKM
2006842
(v2.0)		Etf1NM_144866225363
42.37453.2957102.239275.728325.26388.383948.917972.5768273.313101.744
SPR_Histone_Erkek_5KaroundTSS
Enrichment of Histone Variant and Modification (+/- 5Kb from TSS)
0.558
H3.3
Rep.1
0.505
H3.3
Rep.2
4.949
H3K4me3
Rep.1
4.362
H3K4me3
Rep.2
-2.713
H3K27me3
Rep.1
-2.731
H3K27me3
Rep.2
DBTMEEGeneEntrezH3.3_1_ChIP/InputH3.3_1(Enrich; log2)H3.3_2_ChIP/InputH3.3_2(Enrich; log2)H3K4me3_1_ChIP/InputH3K4me3_1(Enrich; log2)H3K4me3_2_ChIP/InputH3K4me3_2(Enrich; log2)H3K27me3_1_ChIP/InputH3K27me3_1(Enrich; log2)H3K27me3_2_ChIP/InputH3K27me3_2(Enrich; log2)
2006842
(v2.0)		Etf1225363
795/3780.5585582/3780.5053992/3784.94893109/3784.362213/378-2.712985/378-2.7305
SPR_Histone_Erkek_2KaroundTSS
Enrichment of Histone Variant and Modification (+/- 2Kb from TSS)
0.761
H3.3
Rep.1
0.618
H3.3
Rep.2
5.814
H3K4me3
Rep.1
5.073
H3K4me3
Rep.2
-2.121
H3K27me3
Rep.1
-2.567
H3K27me3
Rep.2
DBTMEEGeneEntrezH3.3_1_ChIP/InputH3.3_1(Enrich; log2)H3.3_2_ChIP/InputH3.3_2(Enrich; log2)H3K4me3_1_ChIP/InputH3K4me3_1(Enrich; log2)H3K4me3_2_ChIP/InputH3K4me3_2(Enrich; log2)H3K27me3_1_ChIP/InputH3K27me3_1(Enrich; log2)H3K27me3_2_ChIP/InputH3K27me3_2(Enrich; log2)
2006842
(v2.0)		Etf1225363
429/1770.7611295/1770.6179876/1775.81422401/1775.07339/177-2.121444/177-2.5668
SPR_Methy_Kobayashi_5KaroundTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level
2006842
(v2.0)		Etf1225363
41.965113930.19
SPR_Methy_Kobayashi_2KaroundTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level
2006842
(v2.0)		Etf1225363
12.465510312.1
SOLiD_OocyteTo4C_FPKM_gene_guided N/A
SOLiD_Illumina_Oo_1C_Sperm_FPKM_gene_guided N/A
SOLiD_Partheno1C_FPKM_gene_guided N/A
SOLiD_Illumina_Oo_p1C_Sperm_FPKM_gene_guided N/A
SOLiD_Partheno4C_FPKM_gene_guided N/A
Illumina_Oo_2C_FPKM_gene_guided N/A
SOLiD_SC_Oo_REPLICA_FPKM_gene_guided N/A
NIA60mer N/A
MOE430 N/A
Agilent44K N/A
Proteome N/A