DBTMEE:2007727
| Gene | Gabpb1 |
| Synonyms | BABPB2
E4TF1
E4TF1-47
E4TF1-53
E4Tf1B
GABPB1-1
GABPB1-2
NRF2B1
NRF2B2 |
| Description | GA repeat binding protein, beta 1 |
| Locus | NM_001271469 UCSC: chr2:126454643-126501328(-) OLP: chr2:126454643-126501328(-)
NM_001271467 UCSC: chr2:126454643-126501328(-) OLP: chr2:126454643-126501328(-)
NM_207669 UCSC: chr2:126454643-126501328(-) OLP: chr2:126454643-126501328(-)
NM_001271468 UCSC: chr2:126454643-126501328(-) OLP: chr2:126454643-126501328(-)
NM_010249 UCSC: chr2:126464755-126501328(-) OLP: chr2:126464755-126501328(-)
NM_001271470 UCSC: chr2:126464755-126502073(-) OLP: chr2:126464755-126502073(-)
NR_073183 UCSC: chr2:126464755-126501328(-) OLP: chr2:126464755-126501328(-)
NM_001271492 UCSC: chr2:126473484-126501328(-) OLP: chr2:126473484-126501328(-)
|
| DB links |
Entrez 14391
MGI 95611
Ensembl ENSMUSG00000027361
Vega OTTMUSG00000015863
|
| Feature | protein-coding |
| GO_BP |
-
 3 Terms
transcription, DNA-templated (GO:0006351)
regulation of transcription, DNA-templated (GO:0006355)
positive regulation of transcription from RNA polymerase II promoter (GO:0045944)
|
| GO_MF |
-
2 Terms
transcription regulatory region DNA binding (GO:0044212)
protein heterodimerization activity (GO:0046982)
|
| GO_CC |
-
1 Terms
|
| KEGG | |
| Ver2_FPKM |
| DBTMEE | Gene | RefSeq | Entrez | SPR_FPKM | Oo_FPKM | 1C_FPKM | 2C_FPKM | 4C_FPKM | ESC_FPKM | MEF_FPKM | p1C_FPKM | p4C_FPKM | iPSC_FPKM |
|---|
2007727
(v2.0) | Gabpb1 | NM_001271467,NM_001271468,NM_001271469,NM_001271470,NM_001271492,NM_010249,NM_207669,NR_073183 | 14391
| 12.696 | 48.2478 | 62.0173 | 53.1624 | 49.1872 | 15.933 | 10.6845 | 65.2258 | 60.3 | 16.2546 |
|
| SPR_Histone_Erkek_5KaroundTSS |
| DBTMEE | Gene | Entrez | H3.3_1_ChIP/Input | H3.3_1(Enrich; log2) | H3.3_2_ChIP/Input | H3.3_2(Enrich; log2) | H3K4me3_1_ChIP/Input | H3K4me3_1(Enrich; log2) | H3K4me3_2_ChIP/Input | H3K4me3_2(Enrich; log2) | H3K27me3_1_ChIP/Input | H3K27me3_1(Enrich; log2) | H3K27me3_2_ChIP/Input | H3K27me3_2(Enrich; log2) |
|---|
2007727
(v2.0) | Gabpb1 | 14391
| 883/366 | 0.7561 | 579/366 | 0.5443 | 812/366 | 4.7054 | 2436/366 | 4.0566 | 10/366 | -3.0148 | 115/366 | -2.2546 |
|
| SPR_Histone_Erkek_2KaroundTSS |
| DBTMEE | Gene | Entrez | H3.3_1_ChIP/Input | H3.3_1(Enrich; log2) | H3.3_2_ChIP/Input | H3.3_2(Enrich; log2) | H3K4me3_1_ChIP/Input | H3K4me3_1(Enrich; log2) | H3K4me3_2_ChIP/Input | H3K4me3_2(Enrich; log2) | H3K27me3_1_ChIP/Input | H3K27me3_1(Enrich; log2) | H3K27me3_2_ChIP/Input | H3K27me3_2(Enrich; log2) |
|---|
2007727
(v2.0) | Gabpb1 | 14391
| 547/170 | 1.1685 | 325/170 | 0.815 | 705/170 | 5.5557 | 2025/170 | 4.8851 | 6/170 | -2.5792 | 69/170 | -1.8773 |
|
| SPR_Methy_Kobayashi_5KaroundTSS |
| DBTMEE | Gene | Entrez | Total_mC_levels | Number_of_mCs | Averaged_Methylation_level |
|---|
2007727
(v2.0) | Gabpb1 | 14391
| 37.7578 | 150 | 25.17 |
|
| SPR_Methy_Kobayashi_2KaroundTSS |
| DBTMEE | Gene | Entrez | Total_mC_levels | Number_of_mCs | Averaged_Methylation_level |
|---|
2007727
(v2.0) | Gabpb1 | 14391
| 12.3862 | 121 | 10.24 |
|
| SOLiD_OocyteTo4C_FPKM_gene_guided |
N/A |
| SOLiD_Illumina_Oo_1C_Sperm_FPKM_gene_guided |
N/A |
| SOLiD_Partheno1C_FPKM_gene_guided |
N/A |
| SOLiD_Illumina_Oo_p1C_Sperm_FPKM_gene_guided |
N/A |
| SOLiD_Partheno4C_FPKM_gene_guided |
N/A |
| Illumina_Oo_2C_FPKM_gene_guided |
N/A |
| SOLiD_SC_Oo_REPLICA_FPKM_gene_guided |
N/A |
| NIA60mer |
| DBTMEE | Array_Feature_Number | Oligo_Parent_Clone | Unigene | Gene | Entrez | U_Cluster | NAP_Cluster | Gene_U/NAP | TIGR | SwissProt | EST | Oo | 1C | 2C | 4C | 8C | Morula | Blastocyst |
|---|
0007799
(v1.0) | 8556 | H3068B09-3 | | Gabpb1 | 14391
| U040971 | NAP094734-001 | Gabpb1; | TC858501 | Q00420 | U,F,2 | 2.8632 | 2.8625 | 2.6861 | 2.7071 | 2.4783 | 2.4911 | 2.513 |
|
| MOE430 |
N/A |
| Agilent44K |
N/A |
| Proteome |
N/A |
