DBTMEE
Database of Transcriptome in Mouse Early Embryos


Gene Search:

DBTMEE:2007913
GeneGfm2
SynonymsEFG2
MST027
DescriptionG elongation factor, mitochondrial 2
LocusNM_001146043 UCSC: chr13:97907892-97951151(+) OLP: chr13:97907892-97951151(+)
NM_001271463 UCSC: chr13:97907892-97946398(+) OLP: chr13:97907892-97946398(+)
NM_001271465 UCSC: chr13:97907892-97946398(+) OLP: chr13:97907892-97946398(+)
NM_001271464 UCSC: chr13:97907892-97946398(+) OLP: chr13:97907892-97946398(+)
NM_177266 UCSC: chr13:97907892-97946398(+) OLP: chr13:97907892-97946398(+)
DB links


Entrez 320806
MGI 2444783
Ensembl ENSMUSG00000021666
Vega OTTMUSG00000034272
Featureprotein-coding
GO_BP
GO_MF
GO_CC
KEGG
Ver2_FPKM
Log10 (FPKM+1)
0.928
SPR
1.384
Oo
1.481
1C
1.109
2C
1
4C
0.876
ESC
0.877
MEF
1.397
p1C
0.918
p4C
0.876
iPSC
DBTMEEGeneRefSeqEntrezSPR_FPKMOo_FPKM1C_FPKM2C_FPKM4C_FPKMESC_FPKMMEF_FPKMp1C_FPKMp4C_FPKMiPSC_FPKM
2007913
(v2.0)		Gfm2NM_001146043,NM_001271463,NM_001271464,NM_001271465,NM_177266320806
7.4719723.191129.284911.8519.000526.519416.535223.96677.284876.51421
SPR_Histone_Erkek_5KaroundTSS
Enrichment of Histone Variant and Modification (+/- 5Kb from TSS)
0.29
H3.3
Rep.1
0.381
H3.3
Rep.2
2.215
H3K4me3
Rep.1
1.284
H3K4me3
Rep.2
-2.826
H3K27me3
Rep.1
-2.823
H3K27me3
Rep.2
DBTMEEGeneEntrezH3.3_1_ChIP/InputH3.3_1(Enrich; log2)H3.3_2_ChIP/InputH3.3_2(Enrich; log2)H3K4me3_1_ChIP/InputH3K4me3_1(Enrich; log2)H3K4me3_2_ChIP/InputH3K4me3_2(Enrich; log2)H3K27me3_1_ChIP/InputH3K27me3_1(Enrich; log2)H3K27me3_2_ChIP/InputH3K27me3_2(Enrich; log2)
2007913
(v2.0)		Gfm2320806
508/2910.2901411/2910.3808115/2912.2152283/2911.28379/291-2.825761/291-2.823
SPR_Histone_Erkek_2KaroundTSS
Enrichment of Histone Variant and Modification (+/- 2Kb from TSS)
0.469
H3.3
Rep.1
0.374
H3.3
Rep.2
3.574
H3K4me3
Rep.1
2.724
H3K4me3
Rep.2
-2.364
H3K27me3
Rep.1
-2.571
H3K27me3
Rep.2
DBTMEEGeneEntrezH3.3_1_ChIP/InputH3.3_1(Enrich; log2)H3.3_2_ChIP/InputH3.3_2(Enrich; log2)H3K4me3_1_ChIP/InputH3K4me3_1(Enrich; log2)H3K4me3_2_ChIP/InputH3K4me3_2(Enrich; log2)H3K27me3_1_ChIP/InputH3K27me3_1(Enrich; log2)H3K27me3_2_ChIP/InputH3K27me3_2(Enrich; log2)
2007913
(v2.0)		Gfm2320806
204/1030.4692145/1030.374112/1033.5741276/1032.72374/103-2.36425/103-2.5711
SPR_Methy_Kobayashi_5KaroundTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level
2007913
(v2.0)		Gfm2320806
92.934514663.65
SPR_Methy_Kobayashi_2KaroundTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level
2007913
(v2.0)		Gfm2320806
27.04617536.06
SOLiD_OocyteTo4C_FPKM_gene_guided N/A
SOLiD_Illumina_Oo_1C_Sperm_FPKM_gene_guided N/A
SOLiD_Partheno1C_FPKM_gene_guided N/A
SOLiD_Illumina_Oo_p1C_Sperm_FPKM_gene_guided N/A
SOLiD_Partheno4C_FPKM_gene_guided N/A
Illumina_Oo_2C_FPKM_gene_guided N/A
SOLiD_SC_Oo_REPLICA_FPKM_gene_guided N/A
NIA60mer N/A
MOE430 N/A
Agilent44K N/A
Proteome N/A