DBTMEE
Database of Transcriptome in Mouse Early Embryos


Gene Search:

DBTMEE:2009249
GeneGnb1
Synonyms
Descriptionguanine nucleotide binding protein (G protein), beta 1
LocusNM_008142 UCSC: chr4:154865470-154933378(+) OLP: chr4:154865470-154933378(+)
NM_001160017 UCSC: chr4:154865470-154933378(+) OLP: chr4:154865470-154933378(+)
NM_001160016 UCSC: chr4:154865470-154933378(+) OLP: chr4:154865470-154933378(+)
DB links


Entrez 14688
MGI 95781
Ensembl ENSMUSG00000029064
Vega OTTMUSG00000010708
Featureprotein-coding
GO_BP
  •   11 Terms
GO_MF
GO_CC
KEGG
Ver2_FPKM
Log10 (FPKM+1)
2.014
SPR
1.479
Oo
1.933
1C
1.665
2C
1.542
4C
1.927
ESC
1.91
MEF
1.945
p1C
1.499
p4C
1.917
iPSC
DBTMEEGeneRefSeqEntrezSPR_FPKMOo_FPKM1C_FPKM2C_FPKM4C_FPKMESC_FPKMMEF_FPKMp1C_FPKMp4C_FPKMiPSC_FPKM
2009249
(v2.0)		Gnb1NM_001160016,NM_001160017,NM_00814214688
102.24529.096984.66545.207533.810783.511880.259987.015830.56781.6871
SPR_Histone_Erkek_5KaroundTSS
Enrichment of Histone Variant and Modification (+/- 5Kb from TSS)
0.213
H3.3
Rep.1
-0.281
H3.3
Rep.2
2.108
H3K4me3
Rep.1
0.988
H3K4me3
Rep.2
-3.668
H3K27me3
Rep.1
-2.106
H3K27me3
Rep.2
DBTMEEGeneEntrezH3.3_1_ChIP/InputH3.3_1(Enrich; log2)H3.3_2_ChIP/InputH3.3_2(Enrich; log2)H3K4me3_1_ChIP/InputH3K4me3_1(Enrich; log2)H3K4me3_2_ChIP/InputH3K4me3_2(Enrich; log2)H3K27me3_1_ChIP/InputH3K27me3_1(Enrich; log2)H3K27me3_2_ChIP/InputH3K27me3_2(Enrich; log2)
2009249
(v2.0)		Gnb114688
781/4720.2133421/472-0.2805171/4722.1081373/4720.98798/472-3.6676165/472-2.1055
SPR_Histone_Erkek_2KaroundTSS
Enrichment of Histone Variant and Modification (+/- 2Kb from TSS)
0.742
H3.3
Rep.1
0.167
H3.3
Rep.2
3.195
H3K4me3
Rep.1
2.15
H3K4me3
Rep.2
-3.498
H3K27me3
Rep.1
-1.873
H3K27me3
Rep.2
DBTMEEGeneEntrezH3.3_1_ChIP/InputH3.3_1(Enrich; log2)H3.3_2_ChIP/InputH3.3_2(Enrich; log2)H3K4me3_1_ChIP/InputH3K4me3_1(Enrich; log2)H3K4me3_2_ChIP/InputH3K4me3_2(Enrich; log2)H3K27me3_1_ChIP/InputH3K27me3_1(Enrich; log2)H3K27me3_2_ChIP/InputH3K27me3_2(Enrich; log2)
2009249
(v2.0)		Gnb114688
440/1840.7418224/1840.1667147/1843.1948328/1842.15013/184-3.498175/184-1.8731
SPR_Methy_Kobayashi_5KaroundTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level
2009249
(v2.0)		Gnb114688
67.098513250.83
SPR_Methy_Kobayashi_2KaroundTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level
2009249
(v2.0)		Gnb114688
14.25717618.76
SOLiD_OocyteTo4C_FPKM_gene_guided N/A
SOLiD_Illumina_Oo_1C_Sperm_FPKM_gene_guided N/A
SOLiD_Partheno1C_FPKM_gene_guided N/A
SOLiD_Illumina_Oo_p1C_Sperm_FPKM_gene_guided N/A
SOLiD_Partheno4C_FPKM_gene_guided N/A
Illumina_Oo_2C_FPKM_gene_guided N/A
SOLiD_SC_Oo_REPLICA_FPKM_gene_guided N/A
NIA60mer
DBTMEEArray_Feature_NumberOligo_Parent_CloneUnigeneGeneEntrezU_ClusterNAP_ClusterGene_U/NAPTIGRSwissProtESTOo1C2C4C8CMorulaBlastocyst
0009371
(v1.0)		345C0102D07-3Mm.2344Gnb114688
U042607NAP012249-001Gnb1;TC919578,TC919577,TC919574Q61621U,F,23.66843.66753.38933.3553.37213.55713.6596
0009371
(v1.0)		10333H3094D02-3Mm.200776Gnb114688
U042607NAP107869-1Gnb1;TC836832Q61621U,F,22.94353.06252.7752.50622.41432.69832.6552
MOE430 N/A
Agilent44K N/A
Proteome N/A