DBTMEE
Database of Transcriptome in Mouse Early Embryos


Gene Search:

DBTMEE:2009727
GeneH2afz
SynonymsH2A.Z
DescriptionH2A histone family, member Z
LocusNM_016750 UCSC: chr3:137527451-137529886(+) OLP: chr3:137527451-137529886(+)
DB links


Entrez 51788
MGI 1888388
Ensembl ENSMUSG00000037894
Vega OTTMUSG00000022256
Featureprotein-coding
GO_BP
  •   4 Terms
      nucleosome assembly (GO:0006334)
      multicellular organismal development (GO:0007275)
      positive regulation of transcription from RNA polymerase II promoter (GO:0045944)
      cellular response to estradiol stimulus (GO:0071392)
GO_MF
  •   7 Terms
      RNA polymerase II core promoter proximal region sequence-specific DNA binding (GO:0000978)
      RNA polymerase II core promoter sequence-specific DNA binding (GO:0000979)
      RNA polymerase II distal enhancer sequence-specific DNA binding (GO:0000980)
      DNA binding (GO:0003677)
      chromatin DNA binding (GO:0031490)
      nucleosomal DNA binding (GO:0031492)
      protein heterodimerization activity (GO:0046982)
GO_CC
KEGG
  •   1 Terms
      Systemic lupus erythematosus (mmu05322)
Ver2_FPKM
DBTMEEGeneRefSeqEntrezSPR_FPKMOo_FPKM1C_FPKM2C_FPKM4C_FPKMESC_FPKMMEF_FPKMp1C_FPKMp4C_FPKMiPSC_FPKM
2009727
(v2.0)		H2afzNM_01675051788
151.8389.4495725.4896376.774523.2841396.83209.64118.0104591.7081760.26
SPR_Histone_Erkek_5KaroundTSS
DBTMEEGeneEntrezH3.3_1_ChIP/InputH3.3_1(Enrich; log2)H3.3_2_ChIP/InputH3.3_2(Enrich; log2)H3K4me3_1_ChIP/InputH3K4me3_1(Enrich; log2)H3K4me3_2_ChIP/InputH3K4me3_2(Enrich; log2)H3K27me3_1_ChIP/InputH3K27me3_1(Enrich; log2)H3K27me3_2_ChIP/InputH3K27me3_2(Enrich; log2)
2009727
(v2.0)		H2afz51788
747/3720.4919462/3720.1959260/3723.0435613/3722.044538/372-1.212300/372-0.9063
SPR_Histone_Erkek_2KaroundTSS
DBTMEEGeneEntrezH3.3_1_ChIP/InputH3.3_1(Enrich; log2)H3.3_2_ChIP/InputH3.3_2(Enrich; log2)H3K4me3_1_ChIP/InputH3K4me3_1(Enrich; log2)H3K4me3_2_ChIP/InputH3K4me3_2(Enrich; log2)H3K27me3_1_ChIP/InputH3K27me3_1(Enrich; log2)H3K27me3_2_ChIP/InputH3K27me3_2(Enrich; log2)
2009727
(v2.0)		H2afz51788
382/1360.972228/1360.6255157/1363.6941379/1362.78727/136-2.073271/136-1.5172
SPR_Methy_Kobayashi_5KaroundTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level
2009727
(v2.0)		H2afz51788
46.092420822.16
SPR_Methy_Kobayashi_2KaroundTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level
2009727
(v2.0)		H2afz51788
11.79681319.01
SOLiD_OocyteTo4C_FPKM_gene_guided N/A
SOLiD_Illumina_Oo_1C_Sperm_FPKM_gene_guided N/A
SOLiD_Partheno1C_FPKM_gene_guided N/A
SOLiD_Illumina_Oo_p1C_Sperm_FPKM_gene_guided N/A
SOLiD_Partheno4C_FPKM_gene_guided N/A
Illumina_Oo_2C_FPKM_gene_guided N/A
SOLiD_SC_Oo_REPLICA_FPKM_gene_guided N/A
NIA60mer N/A
MOE430 N/A
Agilent44K N/A
Proteome N/A