DBTMEE

DBTMEE
Database of Transcriptome in Mouse Early Embryos

DBTMEE:2009790

Gene

Hbs1l

Synonyms

eRFS

Description

Hbs1-like (S. cerevisiae)

Locus

NM_019702 UCSC: chr10:21015785-21088695(+) OLP: chr10:21015785-21088695(+)
NM_001042593 UCSC: chr10:21015785-21088695(+) OLP: chr10:21015785-21088695(+)
NM_001145209 UCSC: chr10:21015785-21031004(+) OLP: chr10:21015785-21031004(+)

DB links

Entrez 56422
MGI 1891704
Ensembl ENSMUSG00000019977

Feature

protein-coding

GO_BP

2 Terms

GO_MF

4 Terms

GO_CC

1 Terms

KEGG

1 Terms

DBTMEE	Gene	RefSeq	Entrez	SPR_FPKM	Oo_FPKM	1C_FPKM	2C_FPKM	4C_FPKM	ESC_FPKM	MEF_FPKM	p1C_FPKM	p4C_FPKM	iPSC_FPKM
2009790 (v2.0)	Hbs1l	NM_001042593,NM_001145209,NM_019702	56422	53.4837	22.8124	30.5996	6.36282	10.4902	21.8328	10.1722	25.593	9.26064	23.6372

SPR_Histone_Erkek_5KaroundTSS

DBTMEE	Gene	Entrez	H3.3_1_ChIP/Input	H3.3_1(Enrich; log2)	H3.3_2_ChIP/Input	H3.3_2(Enrich; log2)	H3K4me3_1_ChIP/Input	H3K4me3_1(Enrich; log2)	H3K4me3_2_ChIP/Input	H3K4me3_2(Enrich; log2)	H3K27me3_1_ChIP/Input	H3K27me3_1(Enrich; log2)	H3K27me3_2_ChIP/Input	H3K27me3_2(Enrich; log2)
2009790 (v2.0)	Hbs1l	56422	724/466	0.1226	540/466	0.0962	639/466	4.0217	2082/466	3.4838	38/466	-1.5338	332/466	-1.085

SPR_Histone_Erkek_2KaroundTSS

DBTMEE	Gene	Entrez	H3.3_1_ChIP/Input	H3.3_1(Enrich; log2)	H3.3_2_ChIP/Input	H3.3_2(Enrich; log2)	H3K4me3_1_ChIP/Input	H3K4me3_1(Enrich; log2)	H3K4me3_2_ChIP/Input	H3K4me3_2(Enrich; log2)	H3K27me3_1_ChIP/Input	H3K27me3_1(Enrich; log2)	H3K27me3_2_ChIP/Input	H3K27me3_2(Enrich; log2)
2009790 (v2.0)	Hbs1l	56422	378/208	0.3475	278/208	0.301	571/208	4.9787	1696/208	4.3423	13/208	-1.8639	99/208	-1.6554

SPR_Methy_Kobayashi_5KaroundTSS

DBTMEE	Gene	Entrez	Total_mC_levels	Number_of_mCs	Averaged_Methylation_level
2009790 (v2.0)	Hbs1l	56422	59.4888	128	46.48

SPR_Methy_Kobayashi_2KaroundTSS

DBTMEE	Gene	Entrez	Total_mC_levels	Number_of_mCs	Averaged_Methylation_level
2009790 (v2.0)	Hbs1l	56422	23.5724	79	29.84

SOLiD_OocyteTo4C_FPKM_gene_guided

N/A

SOLiD_Illumina_Oo_1C_Sperm_FPKM_gene_guided

N/A

SOLiD_Partheno1C_FPKM_gene_guided

N/A

SOLiD_Illumina_Oo_p1C_Sperm_FPKM_gene_guided

N/A

SOLiD_Partheno4C_FPKM_gene_guided

N/A

Illumina_Oo_2C_FPKM_gene_guided

N/A

SOLiD_SC_Oo_REPLICA_FPKM_gene_guided

N/A

DBTMEE	Array_Feature_Number	Oligo_Parent_Clone	Unigene	Gene	Entrez	U_Cluster	NAP_Cluster	Gene_U/NAP	TIGR	SwissProt	EST	Oo	1C	2C	4C	8C	Morula	Blastocyst
0009908 (v1.0)	5937	H3013B03-3	Mm.28882	Hbs1l	56422	U011325	NAP092665-001	Hbs1l;	TC935674	Q91Z32	U,F,2	2.9658	3.2764	2.9414	2.8968	2.6487	3.0652	3.0843

N/A

N/A

N/A