DBTMEE
Database of Transcriptome in Mouse Early Embryos


Gene Search:

DBTMEE:2010012
GeneHmg20b
SynonymsBRAF35
BRCA2-associated factor 35
Hmgx2
Hmgxb2
Smarce1r
Descriptionhigh mobility group 20B
LocusNM_010440 UCSC: chr10:80808791-80813172(-) OLP: chr10:80808791-80813172(-)
NM_001163166 UCSC: chr10:80808791-80813202(-) OLP: chr10:80808791-80813202(-)
NM_001163165 UCSC: chr10:80808791-80813171(-) OLP: chr10:80808791-80813171(-)
DB links


Entrez 15353
MGI 1341190
Ensembl ENSMUSG00000020232
Vega OTTMUSG00000017278
Featureprotein-coding
GO_BP
GO_MF
GO_CC
KEGG
Ver2_FPKM
DBTMEEGeneRefSeqEntrezSPR_FPKMOo_FPKM1C_FPKM2C_FPKM4C_FPKMESC_FPKMMEF_FPKMp1C_FPKMp4C_FPKMiPSC_FPKM
2010012
(v2.0)		Hmg20bNM_001163165,NM_001163166,NM_01044015353
27.427817.85717.086510.144913.901823.639613.579823.67516.676526.4506
SPR_Histone_Erkek_5KaroundTSS
DBTMEEGeneEntrezH3.3_1_ChIP/InputH3.3_1(Enrich; log2)H3.3_2_ChIP/InputH3.3_2(Enrich; log2)H3K4me3_1_ChIP/InputH3K4me3_1(Enrich; log2)H3K4me3_2_ChIP/InputH3K4me3_2(Enrich; log2)H3K27me3_1_ChIP/InputH3K27me3_1(Enrich; log2)H3K27me3_2_ChIP/InputH3K27me3_2(Enrich; log2)
2010012
(v2.0)		Hmg20b15353
869/5210.2249396/521-0.510882/5210.9178321/5210.630180/521-0.639595/521-0.4068
SPR_Histone_Erkek_2KaroundTSS
DBTMEEGeneEntrezH3.3_1_ChIP/InputH3.3_1(Enrich; log2)H3.3_2_ChIP/InputH3.3_2(Enrich; log2)H3K4me3_1_ChIP/InputH3K4me3_1(Enrich; log2)H3K4me3_2_ChIP/InputH3K4me3_2(Enrich; log2)H3K27me3_1_ChIP/InputH3K27me3_1(Enrich; log2)H3K27me3_2_ChIP/InputH3K27me3_2(Enrich; log2)
2010012
(v2.0)		Hmg20b15353
391/2230.2961177/223-0.447157/2231.5817186/2231.061110/223-2.3104130/223-1.3676
SPR_Methy_Kobayashi_5KaroundTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level
2010012
(v2.0)		Hmg20b15353
69.274721332.52
SPR_Methy_Kobayashi_2KaroundTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level
2010012
(v2.0)		Hmg20b15353
26.370710624.88
SOLiD_OocyteTo4C_FPKM_gene_guided N/A
SOLiD_Illumina_Oo_1C_Sperm_FPKM_gene_guided N/A
SOLiD_Partheno1C_FPKM_gene_guided N/A
SOLiD_Illumina_Oo_p1C_Sperm_FPKM_gene_guided N/A
SOLiD_Partheno4C_FPKM_gene_guided N/A
Illumina_Oo_2C_FPKM_gene_guided N/A
SOLiD_SC_Oo_REPLICA_FPKM_gene_guided N/A
NIA60mer
DBTMEEArray_Feature_NumberOligo_Parent_CloneUnigeneGeneEntrezU_ClusterNAP_ClusterGene_U/NAPTIGRSwissProtESTOo1C2C4C8CMorulaBlastocyst
0010129
(v1.0)		21858L0920C04-3Hmg20b15353
U032043NAP016726-001Hmg20b;TC925734,TC925730,TC925729,TC925728,TC925726Q9NSF73.69453.56173.34223.88233.82173.98913.8512
MOE430 N/A
Agilent44K N/A
Proteome N/A