DBTMEE
Database of Transcriptome in Mouse Early Embryos


Gene Search:

DBTMEE:2010797
GeneKalrn
SynonymsHapip
LOC224126
Descriptionkalirin, RhoGEF kinase
LocusNM_177357 UCSC: chr16:33969159-34514113(-) OLP: chr16:33969159-34514113(-)
NM_001164268 UCSC: chr16:34152111-34514113(-) OLP: chr16:34152111-34514113(-)
DB links


Entrez 545156
MGI 2685385
Ensembl ENSMUSG00000061751
Vega OTTMUSG00000017795
Featureprotein-coding
GO_BP
GO_MF
GO_CC
KEGG
Ver2_FPKM
Log10 (FPKM+1)
0.059
SPR
0.941
Oo
1.19
1C
0.987
2C
0.845
4C
0.123
ESC
0.077
MEF
1.275
p1C
0.794
p4C
0.16
iPSC
DBTMEEGeneRefSeqEntrezSPR_FPKMOo_FPKM1C_FPKM2C_FPKM4C_FPKMESC_FPKMMEF_FPKMp1C_FPKMp4C_FPKMiPSC_FPKM
2010797
(v2.0)		KalrnNM_001164268,NM_177357545156
0.1443257.7211914.49478.696585.991480.3264850.1944217.8295.219230.445873
SPR_Histone_Erkek_5KaroundTSS
Enrichment of Histone Variant and Modification (+/- 5Kb from TSS)
-0.18
H3.3
Rep.1
-0.479
H3.3
Rep.2
-1.369
H3K4me3
Rep.1
-2.002
H3K4me3
Rep.2
-0.096
H3K27me3
Rep.1
0.52
H3K27me3
Rep.2
DBTMEEGeneEntrezH3.3_1_ChIP/InputH3.3_1(Enrich; log2)H3.3_2_ChIP/InputH3.3_2(Enrich; log2)H3K4me3_1_ChIP/InputH3K4me3_1(Enrich; log2)H3K4me3_2_ChIP/InputH3K4me3_2(Enrich; log2)H3K27me3_1_ChIP/InputH3K27me3_1(Enrich; log2)H3K27me3_2_ChIP/InputH3K27me3_2(Enrich; log2)
2010797
(v2.0)		Kalrn545156
695/552-0.1801429/552-0.478917/552-1.368954/552-2.0024124/552-0.09581200/5520.5202
SPR_Histone_Erkek_2KaroundTSS
Enrichment of Histone Variant and Modification (+/- 2Kb from TSS)
-0.37
H3.3
Rep.1
-0.634
H3.3
Rep.2
-1.4
H3K4me3
Rep.1
-2.292
H3K4me3
Rep.2
-0.09
H3K27me3
Rep.1
0.521
H3K27me3
Rep.2
DBTMEEGeneEntrezH3.3_1_ChIP/InputH3.3_1(Enrich; log2)H3.3_2_ChIP/InputH3.3_2(Enrich; log2)H3K4me3_1_ChIP/InputH3K4me3_1(Enrich; log2)H3K4me3_2_ChIP/InputH3K4me3_2(Enrich; log2)H3K27me3_1_ChIP/InputH3K27me3_1(Enrich; log2)H3K27me3_2_ChIP/InputH3K27me3_2(Enrich; log2)
2010797
(v2.0)		Kalrn545156
269/244-0.3704170/244-0.63437/244-1.399719/244-2.292355/244-0.09531/2440.5207
SPR_Methy_Kobayashi_5KaroundTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level
2010797
(v2.0)		Kalrn545156
100.8810893.41
SPR_Methy_Kobayashi_2KaroundTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level
2010797
(v2.0)		Kalrn545156
44.86584795.46
SOLiD_OocyteTo4C_FPKM_gene_guided N/A
SOLiD_Illumina_Oo_1C_Sperm_FPKM_gene_guided N/A
SOLiD_Partheno1C_FPKM_gene_guided N/A
SOLiD_Illumina_Oo_p1C_Sperm_FPKM_gene_guided N/A
SOLiD_Partheno4C_FPKM_gene_guided N/A
Illumina_Oo_2C_FPKM_gene_guided N/A
SOLiD_SC_Oo_REPLICA_FPKM_gene_guided N/A
NIA60mer N/A
MOE430 N/A
Agilent44K N/A
Proteome N/A