DBTMEE
Database of Transcriptome in Mouse Early Embryos


Gene Search:

DBTMEE:2010936
GeneKctd13
SynonymsPdip1
Poldip1
Descriptionpotassium channel tetramerisation domain containing 13
LocusNM_172747 UCSC: chr7:134072393-134089123(+) OLP: chr7:134072393-134089123(+)
DB links


Entrez 233877
MGI 1923739
Ensembl ENSMUSG00000030685
Vega OTTMUSG00000023162
Featureprotein-coding
GO_BP
GO_MF
GO_CC
KEGG
Ver2_FPKM
Log10 (FPKM+1)
1.04
SPR
1.614
Oo
1.949
1C
1.398
2C
1.321
4C
0.998
ESC
0.537
MEF
2.187
p1C
1.252
p4C
0.976
iPSC
DBTMEEGeneRefSeqEntrezSPR_FPKMOo_FPKM1C_FPKM2C_FPKM4C_FPKMESC_FPKMMEF_FPKMp1C_FPKMp4C_FPKMiPSC_FPKM
2010936
(v2.0)		Kctd13NM_172747233877
9.9641440.188.00924.015919.94518.94772.44599152.78116.87718.46291
SPR_Histone_Erkek_5KaroundTSS
Enrichment of Histone Variant and Modification (+/- 5Kb from TSS)
0.193
H3.3
Rep.1
0.021
H3.3
Rep.2
4.022
H3K4me3
Rep.1
3.206
H3K4me3
Rep.2
-1.158
H3K27me3
Rep.1
-0.898
H3K27me3
Rep.2
DBTMEEGeneEntrezH3.3_1_ChIP/InputH3.3_1(Enrich; log2)H3.3_2_ChIP/InputH3.3_2(Enrich; log2)H3K4me3_1_ChIP/InputH3K4me3_1(Enrich; log2)H3K4me3_2_ChIP/InputH3K4me3_2(Enrich; log2)H3K27me3_1_ChIP/InputH3K27me3_1(Enrich; log2)H3K27me3_2_ChIP/InputH3K27me3_2(Enrich; log2)
2010936
(v2.0)		Kctd13233877
736/4510.1934496/4510.021619/4514.02191662/4513.205848/451-1.1577366/451-0.8979
SPR_Histone_Erkek_2KaroundTSS
Enrichment of Histone Variant and Modification (+/- 2Kb from TSS)
0.334
H3.3
Rep.1
0.106
H3.3
Rep.2
4.556
H3K4me3
Rep.1
3.7
H3K4me3
Rep.2
-1.121
H3K27me3
Rep.1
-1.012
H3K27me3
Rep.2
DBTMEEGeneEntrezH3.3_1_ChIP/InputH3.3_1(Enrich; log2)H3.3_2_ChIP/InputH3.3_2(Enrich; log2)H3K4me3_1_ChIP/InputH3K4me3_1(Enrich; log2)H3K4me3_2_ChIP/InputH3K4me3_2(Enrich; log2)H3K27me3_1_ChIP/InputH3K27me3_1(Enrich; log2)H3K27me3_2_ChIP/InputH3K27me3_2(Enrich; log2)
2010936
(v2.0)		Kctd13233877
335/1860.3344217/1860.1056383/1864.5557973/1863.700520/186-1.121139/186-1.0117
SPR_Methy_Kobayashi_5KaroundTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level
2010936
(v2.0)		Kctd13233877
72.299513553.56
SPR_Methy_Kobayashi_2KaroundTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level
2010936
(v2.0)		Kctd13233877
24.70818429.41
SOLiD_OocyteTo4C_FPKM_gene_guided N/A
SOLiD_Illumina_Oo_1C_Sperm_FPKM_gene_guided N/A
SOLiD_Partheno1C_FPKM_gene_guided N/A
SOLiD_Illumina_Oo_p1C_Sperm_FPKM_gene_guided N/A
SOLiD_Partheno4C_FPKM_gene_guided N/A
Illumina_Oo_2C_FPKM_gene_guided N/A
SOLiD_SC_Oo_REPLICA_FPKM_gene_guided N/A
NIA60mer N/A
MOE430 N/A
Agilent44K N/A
Proteome N/A