DBTMEE
Database of Transcriptome in Mouse Early Embryos


Gene Search:

DBTMEE:2010964
GeneKdm3b
SynonymsJHDM2B
Jmjd1b
DescriptionKDM3B lysine (K)-specific demethylase 3B
LocusNM_001081256 UCSC: chr18:34936662-34999024(+) OLP: chr18:34936662-34999024(+)
DB links


Entrez 277250
MGI 1923356
Ensembl ENSMUSG00000038773
Featureprotein-coding
GO_BP
GO_MF
  •   10 Terms
      sulfonate dioxygenase activity (GO:0000907)
      oxidoreductase activity (GO:0016491)
      2,4-dichlorophenoxyacetate alpha-ketoglutarate dioxygenase activity (GO:0018602)
      procollagen-proline dioxygenase activity (GO:0019798)
      hypophosphite dioxygenase activity (GO:0034792)
      DNA-N1-methyladenine dioxygenase activity (GO:0043734)
      metal ion binding (GO:0046872)
      dioxygenase activity (GO:0051213)
      C-19 gibberellin 2-beta-dioxygenase activity (GO:0052634)
      C-20 gibberellin 2-beta-dioxygenase activity (GO:0052635)
GO_CC
KEGG
Ver2_FPKM
DBTMEEGeneRefSeqEntrezSPR_FPKMOo_FPKM1C_FPKM2C_FPKM4C_FPKMESC_FPKMMEF_FPKMp1C_FPKMp4C_FPKMiPSC_FPKM
2010964
(v2.0)		Kdm3bNM_001081256277250
10.63874.009424.6868615.972330.860817.31510.51484.8964927.750912.4953
SPR_Histone_Erkek_5KaroundTSS
DBTMEEGeneEntrezH3.3_1_ChIP/InputH3.3_1(Enrich; log2)H3.3_2_ChIP/InputH3.3_2(Enrich; log2)H3K4me3_1_ChIP/InputH3K4me3_1(Enrich; log2)H3K4me3_2_ChIP/InputH3K4me3_2(Enrich; log2)H3K27me3_1_ChIP/InputH3K27me3_1(Enrich; log2)H3K27me3_2_ChIP/InputH3K27me3_2(Enrich; log2)
2010964
(v2.0)		Kdm3b277250
745/4710.1484426/471-0.2605245/4712.6273883/4712.231912/471-3.134185/471-3.0471
SPR_Histone_Erkek_2KaroundTSS
DBTMEEGeneEntrezH3.3_1_ChIP/InputH3.3_1(Enrich; log2)H3.3_2_ChIP/InputH3.3_2(Enrich; log2)H3K4me3_1_ChIP/InputH3K4me3_1(Enrich; log2)H3K4me3_2_ChIP/InputH3K4me3_2(Enrich; log2)H3K27me3_1_ChIP/InputH3K27me3_1(Enrich; log2)H3K27me3_2_ChIP/InputH3K27me3_2(Enrich; log2)
2010964
(v2.0)		Kdm3b277250
381/1840.5348218/1840.1278213/1843.7268725/1843.2923/184-3.498137/184-2.8634
SPR_Methy_Kobayashi_5KaroundTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level
2010964
(v2.0)		Kdm3b277250
50.967612640.45
SPR_Methy_Kobayashi_2KaroundTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level
2010964
(v2.0)		Kdm3b277250
9.51467313.03
SOLiD_OocyteTo4C_FPKM_gene_guided N/A
SOLiD_Illumina_Oo_1C_Sperm_FPKM_gene_guided N/A
SOLiD_Partheno1C_FPKM_gene_guided N/A
SOLiD_Illumina_Oo_p1C_Sperm_FPKM_gene_guided N/A
SOLiD_Partheno4C_FPKM_gene_guided N/A
Illumina_Oo_2C_FPKM_gene_guided N/A
SOLiD_SC_Oo_REPLICA_FPKM_gene_guided N/A
NIA60mer N/A
MOE430 N/A
Agilent44K N/A
Proteome N/A