DBTMEE
Database of Transcriptome in Mouse Early Embryos


Gene Search:

DBTMEE:2011842
GeneLtv1
Synonyms
DescriptionLTV1 homolog (S. cerevisiae)
LocusNM_181470 UCSC: chr10:12898444-12912943(-) OLP: chr10:12898444-12912943(-)
DB links


Entrez 353258
MGI 2447810
Ensembl ENSMUSG00000019814
Featureprotein-coding
GO_BP
GO_MF
GO_CC
KEGG
Ver2_FPKM
Log10 (FPKM+1)
1.229
SPR
1.777
Oo
1.598
1C
2.097
2C
2.251
4C
1.669
ESC
1.287
MEF
1.626
p1C
2.184
p4C
1.709
iPSC
DBTMEEGeneRefSeqEntrezSPR_FPKMOo_FPKM1C_FPKM2C_FPKM4C_FPKMESC_FPKMMEF_FPKMp1C_FPKMp4C_FPKMiPSC_FPKM
2011842
(v2.0)		Ltv1NM_181470353258
15.928558.848938.5837123.952177.33645.630518.371341.2604151.950.19
SPR_Histone_Erkek_5KaroundTSS
Enrichment of Histone Variant and Modification (+/- 5Kb from TSS)
0.206
H3.3
Rep.1
0.152
H3.3
Rep.2
2.802
H3K4me3
Rep.1
1.83
H3K4me3
Rep.2
0.081
H3K27me3
Rep.1
-0.124
H3K27me3
Rep.2
DBTMEEGeneEntrezH3.3_1_ChIP/InputH3.3_1(Enrich; log2)H3.3_2_ChIP/InputH3.3_2(Enrich; log2)H3K4me3_1_ChIP/InputH3K4me3_1(Enrich; log2)H3K4me3_2_ChIP/InputH3K4me3_2(Enrich; log2)H3K27me3_1_ChIP/InputH3K27me3_1(Enrich; log2)H3K27me3_2_ChIP/InputH3K27me3_2(Enrich; log2)
2011842
(v2.0)		Ltv1353258
596/3620.206436/3620.1517214/3622.8018514/3621.829992/3620.0806503/362-0.1244
SPR_Histone_Erkek_2KaroundTSS
Enrichment of Histone Variant and Modification (+/- 2Kb from TSS)
0.416
H3.3
Rep.1
0.244
H3.3
Rep.2
3.909
H3K4me3
Rep.1
3.023
H3K4me3
Rep.2
-0.635
H3K27me3
Rep.1
-0.703
H3K27me3
Rep.2
DBTMEEGeneEntrezH3.3_1_ChIP/InputH3.3_1(Enrich; log2)H3.3_2_ChIP/InputH3.3_2(Enrich; log2)H3K4me3_1_ChIP/InputH3K4me3_1(Enrich; log2)H3K4me3_2_ChIP/InputH3K4me3_2(Enrich; log2)H3K27me3_1_ChIP/InputH3K27me3_1(Enrich; log2)H3K27me3_2_ChIP/InputH3K27me3_2(Enrich; log2)
2011842
(v2.0)		Ltv1353258
288/1510.4163194/1510.2438201/1513.9094495/1513.023223/151-0.6349140/151-0.7025
SPR_Methy_Kobayashi_5KaroundTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level
2011842
(v2.0)		Ltv1353258
72.834812060.7
SPR_Methy_Kobayashi_2KaroundTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level
2011842
(v2.0)		Ltv1353258
16.0786126.36
SOLiD_OocyteTo4C_FPKM_gene_guided N/A
SOLiD_Illumina_Oo_1C_Sperm_FPKM_gene_guided N/A
SOLiD_Partheno1C_FPKM_gene_guided N/A
SOLiD_Illumina_Oo_p1C_Sperm_FPKM_gene_guided N/A
SOLiD_Partheno4C_FPKM_gene_guided N/A
Illumina_Oo_2C_FPKM_gene_guided N/A
SOLiD_SC_Oo_REPLICA_FPKM_gene_guided N/A
NIA60mer N/A
MOE430 N/A
Agilent44K N/A
Proteome N/A