DBTMEE

DBTMEE
Database of Transcriptome in Mouse Early Embryos

DBTMEE:2011915

Gene

M6pr

Synonyms

CD-MPR
Mpr46

Description

mannose-6-phosphate receptor, cation dependent

Locus

NM_010749 UCSC: chr6:122259028-122267695(+) OLP: chr6:122259028-122267695(+)

DB links

Entrez 17113
MGI 96904
Ensembl ENSMUSG00000007458
Vega OTTMUSG00000023879

Feature

protein-coding

GO_BP

3 Terms

GO_MF

2 Terms

GO_CC

8 Terms

KEGG

2 Terms

Log10 (FPKM+1)

2.11

SPR

1.339

Oo

1.527

1C

1.745

2C

1.873

4C

2.024

ESC

1.754

MEF

1.419

p1C

1.765

p4C

2.029

iPSC

DBTMEE	Gene	RefSeq	Entrez	SPR_FPKM	Oo_FPKM	1C_FPKM	2C_FPKM	4C_FPKM	ESC_FPKM	MEF_FPKM	p1C_FPKM	p4C_FPKM	iPSC_FPKM
2011915 (v2.0)	M6pr	NM_010749	17113	127.772	20.807	32.6359	54.6129	73.6793	104.656	55.7691	25.2448	57.248	105.788

SPR_Histone_Erkek_5KaroundTSS

Enrichment of Histone Variant and Modification (+/- 5Kb from TSS)

-0.198

H3.3
Rep.1

-0.084

H3.3
Rep.2

0.768

H3K4me3
Rep.1

0.448

H3K4me3
Rep.2

-1.106

H3K27me3
Rep.1

-0.844

H3K27me3
Rep.2

DBTMEE	Gene	Entrez	H3.3_1_ChIP/Input	H3.3_1(Enrich; log2)	H3.3_2_ChIP/Input	H3.3_2(Enrich; log2)	H3K4me3_1_ChIP/Input	H3K4me3_1(Enrich; log2)	H3K4me3_2_ChIP/Input	H3K4me3_2(Enrich; log2)	H3K27me3_1_ChIP/Input	H3K27me3_1(Enrich; log2)	H3K27me3_2_ChIP/Input	H3K27me3_2(Enrich; log2)
2011915 (v2.0)	M6pr	17113	552/444	-0.1982	454/444	-0.0839	63/444	0.7678	241/444	0.4476	49/444	-1.1062	374/444	-0.8443

SPR_Histone_Erkek_2KaroundTSS

Enrichment of Histone Variant and Modification (+/- 2Kb from TSS)

-0.141

H3.3
Rep.1

-0.154

H3.3
Rep.2

1.716

H3K4me3
Rep.1

1.35

H3K4me3
Rep.2

-2.966

H3K27me3
Rep.1

-2.065

H3K27me3
Rep.2

DBTMEE	Gene	Entrez	H3.3_1_ChIP/Input	H3.3_1(Enrich; log2)	H3.3_2_ChIP/Input	H3.3_2(Enrich; log2)	H3K4me3_1_ChIP/Input	H3K4me3_1(Enrich; log2)	H3K4me3_2_ChIP/Input	H3K4me3_2(Enrich; log2)	H3K27me3_1_ChIP/Input	H3K27me3_1(Enrich; log2)	H3K27me3_2_ChIP/Input	H3K27me3_2(Enrich; log2)
2011915 (v2.0)	M6pr	17113	247/191	-0.1411	186/191	-0.1536	54/191	1.7161	195/191	1.3497	5/191	-2.9658	68/191	-2.0651

SPR_Methy_Kobayashi_5KaroundTSS

DBTMEE	Gene	Entrez	Total_mC_levels	Number_of_mCs	Averaged_Methylation_level
2011915 (v2.0)	M6pr	17113	49.3662	137	36.03

SPR_Methy_Kobayashi_2KaroundTSS

DBTMEE	Gene	Entrez	Total_mC_levels	Number_of_mCs	Averaged_Methylation_level
2011915 (v2.0)	M6pr	17113	14.1252	79	17.88

SOLiD_OocyteTo4C_FPKM_gene_guided

N/A

SOLiD_Illumina_Oo_1C_Sperm_FPKM_gene_guided

N/A

SOLiD_Partheno1C_FPKM_gene_guided

N/A

SOLiD_Illumina_Oo_p1C_Sperm_FPKM_gene_guided

N/A

SOLiD_Partheno4C_FPKM_gene_guided

N/A

Illumina_Oo_2C_FPKM_gene_guided

N/A

SOLiD_SC_Oo_REPLICA_FPKM_gene_guided

N/A

DBTMEE	Array_Feature_Number	Oligo_Parent_Clone	Unigene	Gene	Entrez	U_Cluster	NAP_Cluster	Gene_U/NAP	TIGR	SwissProt	EST	Oo	1C	2C	4C	8C	Morula	Blastocyst
0011963 (v1.0)	1220	C0188D10-3	Mm.1358	M6pr	17113	U007368	NAP099663-001	M6pr;	TC940589	P24668	U,F,2	3.1874	3.2702	3.4266	3.5881	3.0662	3.3603	3.2438
0011963 (v1.0)	14659	J0739E01-3	Mm.1358	M6pr	17113	U007368	NAP100309-001	M6pr;	TC940591	P24668	U,F,2	2.3977	2.4027	2.5212	2.6626	2.4961	2.4448	2.4359
0011963 (v1.0)	17850	L0022H03-3	Mm.1358	M6pr	17113	U027821	NAP106859-1			P24668	U,F,2	2.2457	2.3304	2.2476	2.3488	2.4332	2.3107	2.2464

N/A

N/A

N/A