DBTMEE
Database of Transcriptome in Mouse Early Embryos


Gene Search:

DBTMEE:2012168
GeneMcl1
SynonymsMcl-1
Descriptionmyeloid cell leukemia sequence 1
LocusNM_008562 UCSC: chr3:95462643-95467101(+) OLP: chr3:95462643-95467101(+)
DB links


Entrez 17210
MGI 101769
Ensembl ENSMUSG00000038612
Featureprotein-coding
GO_BP
  •   14 Terms
      apoptotic process (GO:0006915)
      multicellular organismal development (GO:0007275)
      intrinsic apoptotic signaling pathway in response to DNA damage (GO:0008630)
      apoptotic mitochondrial changes (GO:0008637)
      cell differentiation (GO:0030154)
      response to cytokine (GO:0034097)
      regulation of apoptotic process (GO:0042981)
      negative regulation of apoptotic process (GO:0043066)
      extrinsic apoptotic signaling pathway in absence of ligand (GO:0097192)
      execution phase of apoptosis (GO:0097194)
      negative regulation of anoikis (GO:2000811)
      regulation of response to DNA damage stimulus (GO:2001020)
      negative regulation of extrinsic apoptotic signaling pathway in absence of ligand (GO:2001240)
      negative regulation of intrinsic apoptotic signaling pathway (GO:2001243)
GO_MF
GO_CC
KEGG
Ver2_FPKM
Log10 (FPKM+1)
2.128
SPR
0.699
Oo
0.99
1C
2.261
2C
2.479
4C
2.225
ESC
1.702
MEF
0.872
p1C
2.35
p4C
2.319
iPSC
DBTMEEGeneRefSeqEntrezSPR_FPKMOo_FPKM1C_FPKM2C_FPKM4C_FPKMESC_FPKMMEF_FPKMp1C_FPKMp4C_FPKMiPSC_FPKM
2012168
(v2.0)		Mcl1NM_00856217210
133.3633.997418.77419181.489300.331166.7449.38036.44537222.923207.219
SPR_Histone_Erkek_5KaroundTSS
Enrichment of Histone Variant and Modification (+/- 5Kb from TSS)
0.369
H3.3
Rep.1
-0.029
H3.3
Rep.2
4.342
H3K4me3
Rep.1
3.816
H3K4me3
Rep.2
-2.649
H3K27me3
Rep.1
-2.53
H3K27me3
Rep.2
DBTMEEGeneEntrezH3.3_1_ChIP/InputH3.3_1(Enrich; log2)H3.3_2_ChIP/InputH3.3_2(Enrich; log2)H3K4me3_1_ChIP/InputH3K4me3_1(Enrich; log2)H3K4me3_2_ChIP/InputH3K4me3_2(Enrich; log2)H3K27me3_1_ChIP/InputH3K27me3_1(Enrich; log2)H3K27me3_2_ChIP/InputH3K27me3_2(Enrich; log2)
2012168
(v2.0)		Mcl117210
859/4660.3688495/466-0.029798/4664.34182622/4663.816317/466-2.6493121/466-2.5298
SPR_Histone_Erkek_2KaroundTSS
Enrichment of Histone Variant and Modification (+/- 2Kb from TSS)
0.799
H3.3
Rep.1
0.272
H3.3
Rep.2
5.169
H3K4me3
Rep.1
4.419
H3K4me3
Rep.2
-3.01
H3K27me3
Rep.1
-2.13
H3K27me3
Rep.2
DBTMEEGeneEntrezH3.3_1_ChIP/InputH3.3_1(Enrich; log2)H3.3_2_ChIP/InputH3.3_2(Enrich; log2)H3K4me3_1_ChIP/InputH3K4me3_1(Enrich; log2)H3K4me3_2_ChIP/InputH3K4me3_2(Enrich; log2)H3K27me3_1_ChIP/InputH3K27me3_1(Enrich; log2)H3K27me3_2_ChIP/InputH3K27me3_2(Enrich; log2)
2012168
(v2.0)		Mcl117210
490/1970.7987258/1970.2717619/1975.16891695/1974.41885/197-3.009567/197-2.1304
SPR_Methy_Kobayashi_5KaroundTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level
2012168
(v2.0)		Mcl117210
51.817312940.17
SPR_Methy_Kobayashi_2KaroundTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level
2012168
(v2.0)		Mcl117210
13.10728814.89
SOLiD_OocyteTo4C_FPKM_gene_guided N/A
SOLiD_Illumina_Oo_1C_Sperm_FPKM_gene_guided N/A
SOLiD_Partheno1C_FPKM_gene_guided N/A
SOLiD_Illumina_Oo_p1C_Sperm_FPKM_gene_guided N/A
SOLiD_Partheno4C_FPKM_gene_guided N/A
Illumina_Oo_2C_FPKM_gene_guided N/A
SOLiD_SC_Oo_REPLICA_FPKM_gene_guided N/A
NIA60mer
DBTMEEArray_Feature_NumberOligo_Parent_CloneUnigeneGeneEntrezU_ClusterNAP_ClusterGene_U/NAPTIGRSwissProtESTOo1C2C4C8CMorulaBlastocyst
0012196
(v1.0)		7534H3049E12-3Mm.1639Mcl117210
U003579NAP098690-001Mcl1;TC836077P97287U,F,22.8112.97333.87214.64743.92754.13433.9427
0012196
(v1.0)		19441L0273F05-3Mm.1639Mcl117210
U003579NAP098690-001Mcl1;TC836083,TC836077P97287U,F,23.54943.72663.68043.8153.76963.73193.7815
MOE430 N/A
Agilent44K N/A
Proteome N/A