DBTMEE
Database of Transcriptome in Mouse Early Embryos


Gene Search:

DBTMEE:2012203
GeneMdh1
SynonymsMDH-s
Mor-2
Mor2
Descriptionmalate dehydrogenase 1, NAD (soluble)
LocusNM_008618 UCSC: chr11:21456695-21471937(-) OLP: chr11:21456695-21471937(-)
DB links


Entrez 17449
MGI 97051
Ensembl ENSMUSG00000020321
Vega OTTMUSG00000005249
Featureprotein-coding
GO_BP
GO_MF
GO_CC
KEGG
  •   5 Terms
      Citrate cycle (TCA cycle) (mmu00020)
      Pyruvate metabolism (mmu00620)
      Glyoxylate and dicarboxylate metabolism (mmu00630)
      Metabolic pathways (mmu01100)
      Proximal tubule bicarbonate reclamation (mmu04964)
Ver2_FPKM
Log10 (FPKM+1)
2.02
SPR
1.516
Oo
1.562
1C
0.746
2C
0.84
4C
1.878
ESC
1.961
MEF
1.375
p1C
0.989
p4C
1.955
iPSC
DBTMEEGeneRefSeqEntrezSPR_FPKMOo_FPKM1C_FPKM2C_FPKM4C_FPKMESC_FPKMMEF_FPKMp1C_FPKMp4C_FPKMiPSC_FPKM
2012203
(v2.0)		Mdh1NM_00861817449
103.69231.819635.49064.574235.9169974.577590.352222.68928.7560489.2298
SPR_Histone_Erkek_5KaroundTSS
Enrichment of Histone Variant and Modification (+/- 5Kb from TSS)
0.193
H3.3
Rep.1
0.138
H3.3
Rep.2
1.82
H3K4me3
Rep.1
1.333
H3K4me3
Rep.2
-1.732
H3K27me3
Rep.1
-1.494
H3K27me3
Rep.2
DBTMEEGeneEntrezH3.3_1_ChIP/InputH3.3_1(Enrich; log2)H3.3_2_ChIP/InputH3.3_2(Enrich; log2)H3K4me3_1_ChIP/InputH3K4me3_1(Enrich; log2)H3K4me3_2_ChIP/InputH3K4me3_2(Enrich; log2)H3K27me3_1_ChIP/InputH3K27me3_1(Enrich; log2)H3K27me3_2_ChIP/InputH3K27me3_2(Enrich; log2)
2012203
(v2.0)		Mdh117449
625/3830.1932457/3830.1383114/3831.8204385/3831.333127/383-1.7317205/383-1.4942
SPR_Histone_Erkek_2KaroundTSS
Enrichment of Histone Variant and Modification (+/- 2Kb from TSS)
0.239
H3.3
Rep.1
0.104
H3.3
Rep.2
2.781
H3K4me3
Rep.1
2.221
H3K4me3
Rep.2
-2.105
H3K27me3
Rep.1
-2.188
H3K27me3
Rep.2
DBTMEEGeneEntrezH3.3_1_ChIP/InputH3.3_1(Enrich; log2)H3.3_2_ChIP/InputH3.3_2(Enrich; log2)H3K4me3_1_ChIP/InputH3K4me3_1(Enrich; log2)H3K4me3_2_ChIP/InputH3K4me3_2(Enrich; log2)H3K27me3_1_ChIP/InputH3K27me3_1(Enrich; log2)H3K27me3_2_ChIP/InputH3K27me3_2(Enrich; log2)
2012203
(v2.0)		Mdh117449
295/1750.2393204/1750.1044105/1752.7811328/1752.22149/175-2.105457/175-2.188
SPR_Methy_Kobayashi_5KaroundTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level
2012203
(v2.0)		Mdh117449
45.755712636.31
SPR_Methy_Kobayashi_2KaroundTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level
2012203
(v2.0)		Mdh117449
10.46668712.03
SOLiD_OocyteTo4C_FPKM_gene_guided N/A
SOLiD_Illumina_Oo_1C_Sperm_FPKM_gene_guided N/A
SOLiD_Partheno1C_FPKM_gene_guided N/A
SOLiD_Illumina_Oo_p1C_Sperm_FPKM_gene_guided N/A
SOLiD_Partheno4C_FPKM_gene_guided N/A
Illumina_Oo_2C_FPKM_gene_guided N/A
SOLiD_SC_Oo_REPLICA_FPKM_gene_guided N/A
NIA60mer N/A
MOE430 N/A
Agilent44K N/A
Proteome N/A