DBTMEE
Database of Transcriptome in Mouse Early Embryos


Gene Search:

DBTMEE:2013753
GeneMrpl48
SynonymsCGI-118
D4Ertd786e
Descriptionmitochondrial ribosomal protein L48
LocusNM_198831 UCSC: chr7:107697631-107731644(-) OLP: chr7:107697631-107731644(-)
NR_003559 UCSC: chr7:107697631-107756510(-) OLP: chr7:107697631-107756510(-)
DB links


Entrez 52443
MGI 1289321
Featureprotein-coding
GO_BP
GO_MF
GO_CC
KEGG
Ver2_FPKM
Log10 (FPKM+1)
1.49
SPR
2.27
Oo
2.204
1C
1.138
2C
1.431
4C
1.349
ESC
1.139
MEF
2.225
p1C
1.427
p4C
1.383
iPSC
DBTMEEGeneRefSeqEntrezSPR_FPKMOo_FPKM1C_FPKM2C_FPKM4C_FPKMESC_FPKMMEF_FPKMp1C_FPKMp4C_FPKMiPSC_FPKM
2013753
(v2.0)		Mrpl48NM_198831,NR_00355952443
29.8724185.378158.89512.725625.959521.312712.7732166.98725.741323.1284
SPR_Histone_Erkek_5KaroundTSS
Enrichment of Histone Variant and Modification (+/- 5Kb from TSS)
0.209
H3.3
Rep.1
0.279
H3.3
Rep.2
0.736
H3K4me3
Rep.1
-0.027
H3K4me3
Rep.2
-0.048
H3K27me3
Rep.1
-0.213
H3K27me3
Rep.2
DBTMEEGeneEntrezH3.3_1_ChIP/InputH3.3_1(Enrich; log2)H3.3_2_ChIP/InputH3.3_2(Enrich; log2)H3K4me3_1_ChIP/InputH3K4me3_1(Enrich; log2)H3K4me3_2_ChIP/InputH3K4me3_2(Enrich; log2)H3K27me3_1_ChIP/InputH3K27me3_1(Enrich; log2)H3K27me3_2_ChIP/InputH3K27me3_2(Enrich; log2)
2013753
(v2.0)		Mrpl4852443
533/3230.2092425/3230.278945/3230.736126/323-0.026675/323-0.0482422/323-0.2129
SPR_Histone_Erkek_2KaroundTSS
Enrichment of Histone Variant and Modification (+/- 2Kb from TSS)
-0.031
H3.3
Rep.1
0.102
H3.3
Rep.2
1.54
H3K4me3
Rep.1
0.854
H3K4me3
Rep.2
-1.592
H3K27me3
Rep.1
-1.59
H3K27me3
Rep.2
DBTMEEGeneEntrezH3.3_1_ChIP/InputH3.3_1(Enrich; log2)H3.3_2_ChIP/InputH3.3_2(Enrich; log2)H3K4me3_1_ChIP/InputH3K4me3_1(Enrich; log2)H3K4me3_2_ChIP/InputH3K4me3_2(Enrich; log2)H3K27me3_1_ChIP/InputH3K27me3_1(Enrich; log2)H3K27me3_2_ChIP/InputH3K27me3_2(Enrich; log2)
2013753
(v2.0)		Mrpl4852443
222/159-0.0311185/1590.101740/1591.5396115/1590.853712/159-1.591979/159-1.5901
SPR_Methy_Kobayashi_5KaroundTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level
2013753
(v2.0)		Mrpl4852443
36.86248543.37
SPR_Methy_Kobayashi_2KaroundTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level
2013753
(v2.0)		Mrpl4852443
9.57965617.11
SOLiD_OocyteTo4C_FPKM_gene_guided N/A
SOLiD_Illumina_Oo_1C_Sperm_FPKM_gene_guided N/A
SOLiD_Partheno1C_FPKM_gene_guided N/A
SOLiD_Illumina_Oo_p1C_Sperm_FPKM_gene_guided N/A
SOLiD_Partheno4C_FPKM_gene_guided N/A
Illumina_Oo_2C_FPKM_gene_guided N/A
SOLiD_SC_Oo_REPLICA_FPKM_gene_guided N/A
NIA60mer N/A
MOE430 N/A
Agilent44K N/A
Proteome N/A