DBTMEE
Database of Transcriptome in Mouse Early Embryos


Gene Search:

DBTMEE:2014040
GeneMyo1b
Synonyms
Descriptionmyosin IB
LocusNM_010863 UCSC: chr1:51806602-51972822(-) OLP: chr1:51806602-51972822(-)
NM_001290982 UCSC: chr1:51806602-51972822(-) OLP: chr1:51806602-51972822(-)
NM_001161817 UCSC: chr1:51806602-51972822(-) OLP: chr1:51806602-51972822(-)
DB links


Entrez 17912
MGI 107752
Ensembl ENSMUSG00000018417
Vega OTTMUSG00000016470
Featureprotein-coding
GO_BP
GO_MF
GO_CC
KEGG
Ver2_FPKM
Log10 (FPKM+1)
1.388
SPR
1.139
Oo
1.294
1C
1.6
2C
1.873
4C
1.039
ESC
0.916
MEF
1.197
p1C
1.788
p4C
0.889
iPSC
DBTMEEGeneRefSeqEntrezSPR_FPKMOo_FPKM1C_FPKM2C_FPKM4C_FPKMESC_FPKMMEF_FPKMp1C_FPKMp4C_FPKMiPSC_FPKM
2014040
(v2.0)		Myo1bNM_001161817,NM_001290982,NM_01086317912
23.435612.767118.671538.818673.62819.942477.2434414.742460.31846.75289
SPR_Histone_Erkek_5KaroundTSS
Enrichment of Histone Variant and Modification (+/- 5Kb from TSS)
0.252
H3.3
Rep.1
0.05
H3.3
Rep.2
1.424
H3K4me3
Rep.1
1.115
H3K4me3
Rep.2
1.581
H3K27me3
Rep.1
1.425
H3K27me3
Rep.2
DBTMEEGeneEntrezH3.3_1_ChIP/InputH3.3_1(Enrich; log2)H3.3_2_ChIP/InputH3.3_2(Enrich; log2)H3K4me3_1_ChIP/InputH3K4me3_1(Enrich; log2)H3K4me3_2_ChIP/InputH3K4me3_2(Enrich; log2)H3K27me3_1_ChIP/InputH3K27me3_1(Enrich; log2)H3K27me3_2_ChIP/InputH3K27me3_2(Enrich; log2)
2014040
(v2.0)		Myo1b17912
833/4900.2522550/4900.0503110/4901.4236423/4901.1152354/4901.58061996/4901.4251
SPR_Histone_Erkek_2KaroundTSS
Enrichment of Histone Variant and Modification (+/- 2Kb from TSS)
0.687
H3.3
Rep.1
0.405
H3.3
Rep.2
2.523
H3K4me3
Rep.1
2.223
H3K4me3
Rep.2
2.179
H3K27me3
Rep.1
1.875
H3K27me3
Rep.2
DBTMEEGeneEntrezH3.3_1_ChIP/InputH3.3_1(Enrich; log2)H3.3_2_ChIP/InputH3.3_2(Enrich; log2)H3K4me3_1_ChIP/InputH3K4me3_1(Enrich; log2)H3K4me3_2_ChIP/InputH3K4me3_2(Enrich; log2)H3K27me3_1_ChIP/InputH3K27me3_1(Enrich; log2)H3K27me3_2_ChIP/InputH3K27me3_2(Enrich; log2)
2014040
(v2.0)		Myo1b17912
458/1990.687286/1990.405399/1992.5229373/1992.2234220/1992.17921110/1991.8751
SPR_Methy_Kobayashi_5KaroundTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level
2014040
(v2.0)		Myo1b17912
58.08611251.86
SPR_Methy_Kobayashi_2KaroundTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level
2014040
(v2.0)		Myo1b17912
12.5866519.36
SOLiD_OocyteTo4C_FPKM_gene_guided N/A
SOLiD_Illumina_Oo_1C_Sperm_FPKM_gene_guided N/A
SOLiD_Partheno1C_FPKM_gene_guided N/A
SOLiD_Illumina_Oo_p1C_Sperm_FPKM_gene_guided N/A
SOLiD_Partheno4C_FPKM_gene_guided N/A
Illumina_Oo_2C_FPKM_gene_guided N/A
SOLiD_SC_Oo_REPLICA_FPKM_gene_guided N/A
NIA60mer
DBTMEEArray_Feature_NumberOligo_Parent_CloneUnigeneGeneEntrezU_ClusterNAP_ClusterGene_U/NAPTIGRSwissProtESTOo1C2C4C8CMorulaBlastocyst
0013586
(v1.0)		12962H3155G10-3Mm.3390Myo1b17912
U021308NAP003592-001Myo1b;TC926227,TC875973,TC875971P46735U,F,23.24473.27623.54753.78183.46073.60683.3665
MOE430 N/A
Agilent44K N/A
Proteome N/A