DBTMEE
Database of Transcriptome in Mouse Early Embryos


Gene Search:

DBTMEE:2014473
GeneNlrp5
SynonymsMater
Nalp5
Op1
DescriptionNLR family, pyrin domain containing 5
LocusNM_011860 UCSC: chr7:24170916-24226940(+) OLP: chr7:24170916-24226940(+)
NM_001039143 UCSC: chr7:24170916-24226940(+) OLP: chr7:24170916-24226940(+)
DB links


Entrez 23968
MGI 1345193
Ensembl ENSMUSG00000015721
Vega OTTMUSG00000024411
Featureprotein-coding
GO_BP
GO_MF
GO_CC
KEGG
Ver2_FPKM
Log10 (FPKM+1)
0.155
SPR
2.621
Oo
2.324
1C
1.573
2C
1.361
4C
0
ESC
0.007
MEF
2.301
p1C
1.526
p4C
0
iPSC
DBTMEEGeneRefSeqEntrezSPR_FPKMOo_FPKM1C_FPKM2C_FPKM4C_FPKMESC_FPKMMEF_FPKMp1C_FPKMp4C_FPKMiPSC_FPKM
2014473
(v2.0)		Nlrp5NM_001039143,NM_01186023968
0.428255416.587209.71636.44921.95100.0152119198.85532.55350
SPR_Histone_Erkek_5KaroundTSS
Enrichment of Histone Variant and Modification (+/- 5Kb from TSS)
0.064
H3.3
Rep.1
0.214
H3.3
Rep.2
-1.06
H3K4me3
Rep.1
-0.252
H3K4me3
Rep.2
-0.951
H3K27me3
Rep.1
-0.98
H3K27me3
Rep.2
DBTMEEGeneEntrezH3.3_1_ChIP/InputH3.3_1(Enrich; log2)H3.3_2_ChIP/InputH3.3_2(Enrich; log2)H3K4me3_1_ChIP/InputH3K4me3_1(Enrich; log2)H3K4me3_2_ChIP/InputH3K4me3_2(Enrich; log2)H3K27me3_1_ChIP/InputH3K27me3_1(Enrich; log2)H3K27me3_2_ChIP/InputH3K27me3_2(Enrich; log2)
2014473
(v2.0)		Nlrp523968
510/3420.0635430/3420.213613/342-1.0597114/342-0.251742/342-0.9513262/342-0.9797
SPR_Histone_Erkek_2KaroundTSS
Enrichment of Histone Variant and Modification (+/- 2Kb from TSS)
0.036
H3.3
Rep.1
0.037
H3.3
Rep.2
-0.579
H3K4me3
Rep.1
-0.316
H3K4me3
Rep.2
-0.175
H3K27me3
Rep.1
-0.32
H3K27me3
Rep.2
DBTMEEGeneEntrezH3.3_1_ChIP/InputH3.3_1(Enrich; log2)H3.3_2_ChIP/InputH3.3_2(Enrich; log2)H3K4me3_1_ChIP/InputH3K4me3_1(Enrich; log2)H3K4me3_2_ChIP/InputH3K4me3_2(Enrich; log2)H3K27me3_1_ChIP/InputH3K27me3_1(Enrich; log2)H3K27me3_2_ChIP/InputH3K27me3_2(Enrich; log2)
2014473
(v2.0)		Nlrp523968
221/1510.0364168/1510.03758/151-0.578948/151-0.316332/151-0.1755183/151-0.3197
SPR_Methy_Kobayashi_5KaroundTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level
2014473
(v2.0)		Nlrp523968
33.12437146.65
SPR_Methy_Kobayashi_2KaroundTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level
2014473
(v2.0)		Nlrp523968
11.05214425.12
SOLiD_OocyteTo4C_FPKM_gene_guided N/A
SOLiD_Illumina_Oo_1C_Sperm_FPKM_gene_guided N/A
SOLiD_Partheno1C_FPKM_gene_guided N/A
SOLiD_Illumina_Oo_p1C_Sperm_FPKM_gene_guided N/A
SOLiD_Partheno4C_FPKM_gene_guided N/A
Illumina_Oo_2C_FPKM_gene_guided N/A
SOLiD_SC_Oo_REPLICA_FPKM_gene_guided N/A
NIA60mer N/A
MOE430 N/A
Agilent44K N/A
Proteome N/A