DBTMEE
Database of Transcriptome in Mouse Early Embryos


Gene Search:

DBTMEE:2016086
GeneOsbpl9
SynonymsORP-9
Descriptionoxysterol binding protein-like 9
LocusNM_173350 UCSC: chr4:108733750-108790641(-) OLP: chr4:108733750-108790641(-)
NM_001134791 UCSC: chr4:108733750-108790641(-) OLP: chr4:108733750-108790641(-)
NM_133885 UCSC: chr4:108733750-108874877(-) OLP: chr4:108733750-108874877(-)
DB links


Entrez 100273
MGI 1923784
Ensembl ENSMUSG00000028559
Vega OTTMUSG00000008293
Featureprotein-coding
GO_BP
GO_MF
GO_CC
KEGG
Ver2_FPKM
Log10 (FPKM+1)
1.834
SPR
2.105
Oo
2.171
1C
1.597
2C
1.565
4C
1.43
ESC
1.561
MEF
2.152
p1C
1.573
p4C
1.445
iPSC
DBTMEEGeneRefSeqEntrezSPR_FPKMOo_FPKM1C_FPKM2C_FPKM4C_FPKMESC_FPKMMEF_FPKMp1C_FPKMp4C_FPKMiPSC_FPKM
2016086
(v2.0)		Osbpl9NM_001134791,NM_133885,NM_173350100273
67.2936126.323147.26538.55735.716425.908435.3507140.95936.408726.8486
SPR_Histone_Erkek_5KaroundTSS
Enrichment of Histone Variant and Modification (+/- 5Kb from TSS)
-0.087
H3.3
Rep.1
-0.106
H3.3
Rep.2
2.13
H3K4me3
Rep.1
2.26
H3K4me3
Rep.2
-3.521
H3K27me3
Rep.1
-2.936
H3K27me3
Rep.2
DBTMEEGeneEntrezH3.3_1_ChIP/InputH3.3_1(Enrich; log2)H3.3_2_ChIP/InputH3.3_2(Enrich; log2)H3K4me3_1_ChIP/InputH3K4me3_1(Enrich; log2)H3K4me3_2_ChIP/InputH3K4me3_2(Enrich; log2)H3K27me3_1_ChIP/InputH3K27me3_1(Enrich; log2)H3K27me3_2_ChIP/InputH3K27me3_2(Enrich; log2)
2016086
(v2.0)		Osbpl9100273
572/426-0.0874429/426-0.1058157/4262.1296815/4262.26058/426-3.52183/426-2.9363
SPR_Histone_Erkek_2KaroundTSS
Enrichment of Histone Variant and Modification (+/- 2Kb from TSS)
0.278
H3.3
Rep.1
0.08
H3.3
Rep.2
3.29
H3K4me3
Rep.1
3.355
H3K4me3
Rep.2
-3.014
H3K27me3
Rep.1
-2.857
H3K27me3
Rep.2
DBTMEEGeneEntrezH3.3_1_ChIP/InputH3.3_1(Enrich; log2)H3.3_2_ChIP/InputH3.3_2(Enrich; log2)H3K4me3_1_ChIP/InputH3K4me3_1(Enrich; log2)H3K4me3_2_ChIP/InputH3K4me3_2(Enrich; log2)H3K27me3_1_ChIP/InputH3K27me3_1(Enrich; log2)H3K27me3_2_ChIP/InputH3K27me3_2(Enrich; log2)
2016086
(v2.0)		Osbpl9100273
284/1640.2778188/1640.0804141/1643.2903676/1643.35484/164-3.01433/164-2.8565
SPR_Methy_Kobayashi_5KaroundTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level
2016086
(v2.0)		Osbpl9100273
59.273110456.99
SPR_Methy_Kobayashi_2KaroundTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level
2016086
(v2.0)		Osbpl9100273
16.53255828.5
SOLiD_OocyteTo4C_FPKM_gene_guided N/A
SOLiD_Illumina_Oo_1C_Sperm_FPKM_gene_guided N/A
SOLiD_Partheno1C_FPKM_gene_guided N/A
SOLiD_Illumina_Oo_p1C_Sperm_FPKM_gene_guided N/A
SOLiD_Partheno4C_FPKM_gene_guided N/A
Illumina_Oo_2C_FPKM_gene_guided N/A
SOLiD_SC_Oo_REPLICA_FPKM_gene_guided N/A
NIA60mer N/A
MOE430 N/A
Agilent44K N/A
Proteome N/A