DBTMEE
Database of Transcriptome in Mouse Early Embryos


Gene Search:

DBTMEE:2016279
GenePatl1
SynonymsPat1b
Descriptionprotein associated with topoisomerase II homolog 1 (yeast)
LocusNM_172635 UCSC: chr19:11986889-12019586(+) OLP: chr19:11986889-12019586(+)
DB links


Entrez 225929
MGI 2147679
Ensembl ENSMUSG00000046139
Featureprotein-coding
GO_BP
  •   3 Terms
      deadenylation-dependent decapping of nuclear-transcribed mRNA (GO:0000290)
      negative regulation of translation (GO:0017148)
      cytoplasmic mRNA processing body assembly (GO:0033962)
GO_MF
GO_CC
KEGG
  •   1 Terms
Ver2_FPKM
DBTMEEGeneRefSeqEntrezSPR_FPKMOo_FPKM1C_FPKM2C_FPKM4C_FPKMESC_FPKMMEF_FPKMp1C_FPKMp4C_FPKMiPSC_FPKM
2016279
(v2.0)		Patl1NM_172635225929
6.999366.2879914.12895.889597.73447.663815.7184515.84856.975017.50414
SPR_Histone_Erkek_5KaroundTSS
DBTMEEGeneEntrezH3.3_1_ChIP/InputH3.3_1(Enrich; log2)H3.3_2_ChIP/InputH3.3_2(Enrich; log2)H3K4me3_1_ChIP/InputH3K4me3_1(Enrich; log2)H3K4me3_2_ChIP/InputH3K4me3_2(Enrich; log2)H3K27me3_1_ChIP/InputH3K27me3_1(Enrich; log2)H3K27me3_2_ChIP/InputH3K27me3_2(Enrich; log2)
2016279
(v2.0)		Patl1225929
718/3850.3854496/3850.2487138/3852.0865347/3851.176165/385-0.5021306/385-0.9273
SPR_Histone_Erkek_2KaroundTSS
DBTMEEGeneEntrezH3.3_1_ChIP/InputH3.3_1(Enrich; log2)H3.3_2_ChIP/InputH3.3_2(Enrich; log2)H3K4me3_1_ChIP/InputH3K4me3_1(Enrich; log2)H3K4me3_2_ChIP/InputH3K4me3_2(Enrich; log2)H3K27me3_1_ChIP/InputH3K27me3_1(Enrich; log2)H3K27me3_2_ChIP/InputH3K27me3_2(Enrich; log2)
2016279
(v2.0)		Patl1225929
372/1550.7465226/1550.4255134/1553.293332/1552.411315/155-1.256678/155-1.5716
SPR_Methy_Kobayashi_5KaroundTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level
2016279
(v2.0)		Patl1225929
37.511411133.79
SPR_Methy_Kobayashi_2KaroundTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level
2016279
(v2.0)		Patl1225929
6.4779788.3
SOLiD_OocyteTo4C_FPKM_gene_guided N/A
SOLiD_Illumina_Oo_1C_Sperm_FPKM_gene_guided N/A
SOLiD_Partheno1C_FPKM_gene_guided N/A
SOLiD_Illumina_Oo_p1C_Sperm_FPKM_gene_guided N/A
SOLiD_Partheno4C_FPKM_gene_guided N/A
Illumina_Oo_2C_FPKM_gene_guided N/A
SOLiD_SC_Oo_REPLICA_FPKM_gene_guided N/A
NIA60mer N/A
MOE430 N/A
Agilent44K N/A
Proteome N/A