DBTMEE
Database of Transcriptome in Mouse Early Embryos


Gene Search:

DBTMEE:2016304
GenePbx2
SynonymsG17
Descriptionpre B cell leukemia homeobox 2
LocusNM_017463 UCSC: chr17:34729416-34734286(+) OLP: chr17:34729416-34734286(+)
DB links


Entrez 18515
MGI 1341793
Ensembl ENSMUSG00000034673
Vega OTTMUSG00000037073
Featureprotein-coding
GO_BP
  •   5 Terms
      transcription, DNA-templated (GO:0006351)
      regulation of transcription, DNA-templated (GO:0006355)
      proximal/distal pattern formation (GO:0009954)
      embryonic limb morphogenesis (GO:0030326)
      positive regulation of transcription from RNA polymerase II promoter (GO:0045944)
GO_MF
GO_CC
KEGG
Ver2_FPKM
Log10 (FPKM+1)
1.254
SPR
1.618
Oo
1.787
1C
0.849
2C
0.812
4C
1.4
ESC
1.287
MEF
1.853
p1C
1.012
p4C
1.381
iPSC
DBTMEEGeneRefSeqEntrezSPR_FPKMOo_FPKM1C_FPKM2C_FPKM4C_FPKMESC_FPKMMEF_FPKMp1C_FPKMp4C_FPKMiPSC_FPKM
2016304
(v2.0)		Pbx2NM_01746318515
16.927540.497160.29086.070565.4808524.109318.367870.29279.2708823.0286
SPR_Histone_Erkek_5KaroundTSS
Enrichment of Histone Variant and Modification (+/- 5Kb from TSS)
0.522
H3.3
Rep.1
-0.291
H3.3
Rep.2
2.855
H3K4me3
Rep.1
2.336
H3K4me3
Rep.2
-0.04
H3K27me3
Rep.1
0.095
H3K27me3
Rep.2
DBTMEEGeneEntrezH3.3_1_ChIP/InputH3.3_1(Enrich; log2)H3.3_2_ChIP/InputH3.3_2(Enrich; log2)H3K4me3_1_ChIP/InputH3K4me3_1(Enrich; log2)H3K4me3_2_ChIP/InputH3K4me3_2(Enrich; log2)H3K27me3_1_ChIP/InputH3K27me3_1(Enrich; log2)H3K27me3_2_ChIP/InputH3K27me3_2(Enrich; log2)
2016304
(v2.0)		Pbx218515
966/4710.5225417/471-0.2912287/4712.8547949/4712.3358110/471-0.0401762/4710.0945
SPR_Histone_Erkek_2KaroundTSS
Enrichment of Histone Variant and Modification (+/- 2Kb from TSS)
0.806
H3.3
Rep.1
-0.162
H3.3
Rep.2
2.975
H3K4me3
Rep.1
2.582
H3K4me3
Rep.2
0.434
H3K27me3
Rep.1
0.529
H3K27me3
Rep.2
DBTMEEGeneEntrezH3.3_1_ChIP/InputH3.3_1(Enrich; log2)H3.3_2_ChIP/InputH3.3_2(Enrich; log2)H3K4me3_1_ChIP/InputH3K4me3_1(Enrich; log2)H3K4me3_2_ChIP/InputH3K4me3_2(Enrich; log2)H3K27me3_1_ChIP/InputH3K27me3_1(Enrich; log2)H3K27me3_2_ChIP/InputH3K27me3_2(Enrich; log2)
2016304
(v2.0)		Pbx218515
475/1900.8059184/190-0.1616130/1902.9753457/1902.581762/1900.4339416/1900.5289
SPR_Methy_Kobayashi_5KaroundTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level
2016304
(v2.0)		Pbx218515
116.3722152.66
SPR_Methy_Kobayashi_2KaroundTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level
2016304
(v2.0)		Pbx218515
41.738410539.75
SOLiD_OocyteTo4C_FPKM_gene_guided N/A
SOLiD_Illumina_Oo_1C_Sperm_FPKM_gene_guided N/A
SOLiD_Partheno1C_FPKM_gene_guided N/A
SOLiD_Illumina_Oo_p1C_Sperm_FPKM_gene_guided N/A
SOLiD_Partheno4C_FPKM_gene_guided N/A
Illumina_Oo_2C_FPKM_gene_guided N/A
SOLiD_SC_Oo_REPLICA_FPKM_gene_guided N/A
NIA60mer
DBTMEEArray_Feature_NumberOligo_Parent_CloneUnigeneGeneEntrezU_ClusterNAP_ClusterGene_U/NAPTIGRSwissProtESTOo1C2C4C8CMorulaBlastocyst
0015833
(v1.0)		10576H3100C03-3Mm.7103Pbx218515
U017859NAP022845-001Pbx2;TC926043O35984U,F2.72762.73822.75972.65372.43862.60872.3573
MOE430 N/A
Agilent44K N/A
Proteome N/A