DBTMEE
Database of Transcriptome in Mouse Early Embryos


Gene Search:

DBTMEE:2016394
GenePcgf6
SynonymsMBLR
Mel18 and Bmi1-like RING finger protein
Rnf134
Descriptionpolycomb group ring finger 6
LocusNM_027654 UCSC: chr19:47108109-47125335(-) OLP: chr19:47108109-47125335(-)
DB links


Entrez 71041
MGI 1918291
Ensembl ENSMUSG00000025050
Featureprotein-coding
GO_BP
  •   4 Terms
      negative regulation of transcription from RNA polymerase II promoter (GO:0000122)
      transcription, DNA-templated (GO:0006351)
      regulation of transcription, DNA-templated (GO:0006355)
      negative regulation of transcription, DNA-templated (GO:0045892)
GO_MF
  •   7 Terms
      RNA polymerase II regulatory region sequence-specific DNA binding (GO:0000977)
      RNA polymerase II transcription regulatory region sequence-specific DNA binding transcription factor activity involved in negative regulation of transcription (GO:0001227)
      DNA binding (GO:0003677)
      sequence-specific DNA binding transcription factor activity (GO:0003700)
      zinc ion binding (GO:0008270)
      protein domain specific binding (GO:0019904)
      metal ion binding (GO:0046872)
GO_CC
KEGG
Ver2_FPKM
DBTMEEGeneRefSeqEntrezSPR_FPKMOo_FPKM1C_FPKM2C_FPKM4C_FPKMESC_FPKMMEF_FPKMp1C_FPKMp4C_FPKMiPSC_FPKM
2016394
(v2.0)		Pcgf6NM_02765471041
3.57823138.232183.75376.314455.482924.81416.10637146.51245.573924.8511
SPR_Histone_Erkek_5KaroundTSS
DBTMEEGeneEntrezH3.3_1_ChIP/InputH3.3_1(Enrich; log2)H3.3_2_ChIP/InputH3.3_2(Enrich; log2)H3K4me3_1_ChIP/InputH3K4me3_1(Enrich; log2)H3K4me3_2_ChIP/InputH3K4me3_2(Enrich; log2)H3K27me3_1_ChIP/InputH3K27me3_1(Enrich; log2)H3K27me3_2_ChIP/InputH3K27me3_2(Enrich; log2)
2016394
(v2.0)		Pcgf671041
765/4600.2206477/460-0.0637200/4602.3691562/4601.614986/460-0.3578674/460-0.0481
SPR_Histone_Erkek_2KaroundTSS
DBTMEEGeneEntrezH3.3_1_ChIP/InputH3.3_1(Enrich; log2)H3.3_2_ChIP/InputH3.3_2(Enrich; log2)H3K4me3_1_ChIP/InputH3K4me3_1(Enrich; log2)H3K4me3_2_ChIP/InputH3K4me3_2(Enrich; log2)H3K27me3_1_ChIP/InputH3K27me3_1(Enrich; log2)H3K27me3_2_ChIP/InputH3K27me3_2(Enrich; log2)
2016394
(v2.0)		Pcgf671041
366/1660.6248200/1660.1517179/1663.6161480/1662.844426/166-0.5981212/166-0.2449
SPR_Methy_Kobayashi_5KaroundTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level
2016394
(v2.0)		Pcgf671041
67.821815543.76
SPR_Methy_Kobayashi_2KaroundTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level
2016394
(v2.0)		Pcgf671041
12.52129313.46
SOLiD_OocyteTo4C_FPKM_gene_guided N/A
SOLiD_Illumina_Oo_1C_Sperm_FPKM_gene_guided N/A
SOLiD_Partheno1C_FPKM_gene_guided N/A
SOLiD_Illumina_Oo_p1C_Sperm_FPKM_gene_guided N/A
SOLiD_Partheno4C_FPKM_gene_guided N/A
Illumina_Oo_2C_FPKM_gene_guided N/A
SOLiD_SC_Oo_REPLICA_FPKM_gene_guided N/A
NIA60mer N/A
MOE430 N/A
Agilent44K N/A
Proteome N/A