DBTMEE
Database of Transcriptome in Mouse Early Embryos


Gene Search:

DBTMEE:2016428
GenePcyox1
SynonymsPCL1
Pcly
Descriptionprenylcysteine oxidase 1
LocusNM_025823 UCSC: chr6:86336000-86347144(-) OLP: chr6:86336000-86347144(-)
DB links


Entrez 66881
MGI 1914131
Ensembl ENSMUSG00000029998
Vega OTTMUSG00000023410
Featureprotein-coding
GO_BP
GO_MF
  •   4 Terms
      prenylcysteine oxidase activity (GO:0001735)
      chloride-transporting ATPase activity (GO:0008555)
      oxidoreductase activity (GO:0016491)
      oxidoreductase activity, acting on a sulfur group of donors, oxygen as acceptor (GO:0016670)
GO_CC
KEGG
Ver2_FPKM
Log10 (FPKM+1)
1.648
SPR
1.589
Oo
1.486
1C
1.116
2C
0.811
4C
1.067
ESC
1.559
MEF
1.422
p1C
0.885
p4C
1.028
iPSC
DBTMEEGeneRefSeqEntrezSPR_FPKMOo_FPKM1C_FPKM2C_FPKM4C_FPKMESC_FPKMMEF_FPKMp1C_FPKMp4C_FPKMiPSC_FPKM
2016428
(v2.0)
Pcyox1NM_02582366881
43.497137.821929.601412.07065.4744210.655435.225125.41696.676639.65938
SPR_Histone_Erkek_5KaroundTSS
Enrichment of Histone Variant and Modification (+/- 5Kb from TSS)
-0.009
H3.3
Rep.1
-0.378
H3.3
Rep.2
1.841
H3K4me3
Rep.1
0.985
H3K4me3
Rep.2
0.695
H3K27me3
Rep.1
0.359
H3K27me3
Rep.2
DBTMEEGeneEntrezH3.3_1_ChIP/InputH3.3_1(Enrich; log2)H3.3_2_ChIP/InputH3.3_2(Enrich; log2)H3K4me3_1_ChIP/InputH3K4me3_1(Enrich; log2)H3K4me3_2_ChIP/InputH3K4me3_2(Enrich; log2)H3K27me3_1_ChIP/InputH3K27me3_1(Enrich; log2)H3K27me3_2_ChIP/InputH3K27me3_2(Enrich; log2)
2016428
(v2.0)
Pcyox166881
665/469-0.009391/469-0.3777141/4691.8405370/4690.9854183/4690.6952912/4690.3594
SPR_Histone_Erkek_2KaroundTSS
Enrichment of Histone Variant and Modification (+/- 2Kb from TSS)
0.136
H3.3
Rep.1
-0.095
H3.3
Rep.2
2.887
H3K4me3
Rep.1
2.048
H3K4me3
Rep.2
1.612
H3K27me3
Rep.1
1.236
H3K27me3
Rep.2
DBTMEEGeneEntrezH3.3_1_ChIP/InputH3.3_1(Enrich; log2)H3.3_2_ChIP/InputH3.3_2(Enrich; log2)H3K4me3_1_ChIP/InputH3K4me3_1(Enrich; log2)H3K4me3_2_ChIP/InputH3K4me3_2(Enrich; log2)H3K27me3_1_ChIP/InputH3K27me3_1(Enrich; log2)H3K27me3_2_ChIP/InputH3K27me3_2(Enrich; log2)
2016428
(v2.0)
Pcyox166881
331/2110.1362214/211-0.0954135/2112.8868350/2112.0484157/2111.6123755/2111.236
SPR_Methy_Kobayashi_5KaroundTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level
2016428
(v2.0)
Pcyox166881
77.185514752.51
SPR_Methy_Kobayashi_2KaroundTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level
2016428
(v2.0)
Pcyox166881
23.7638926.7
SOLiD_OocyteTo4C_FPKM_gene_guided N/A
SOLiD_Illumina_Oo_1C_Sperm_FPKM_gene_guided N/A
SOLiD_Partheno1C_FPKM_gene_guided N/A
SOLiD_Illumina_Oo_p1C_Sperm_FPKM_gene_guided N/A
SOLiD_Partheno4C_FPKM_gene_guided N/A
Illumina_Oo_2C_FPKM_gene_guided N/A
SOLiD_SC_Oo_REPLICA_FPKM_gene_guided N/A
NIA60mer N/A
MOE430 N/A
Agilent44K N/A
Proteome N/A