DBTMEE
Database of Transcriptome in Mouse Early Embryos


Gene Search:

DBTMEE:2016503
GenePdlim5
SynonymsEnh
Enh2
Enh3
DescriptionPDZ and LIM domain 5
LocusNM_001190852 UCSC: chr3:141902549-142058660(-) OLP: chr3:141902549-142058660(-)
NM_019808 UCSC: chr3:141902549-142058660(-) OLP: chr3:141902549-142058660(-)
NM_001190856 UCSC: chr3:141902549-142058660(-) OLP: chr3:141902549-142058660(-)
NM_001190855 UCSC: chr3:141902549-142058660(-) OLP: chr3:141902549-142058660(-)
NM_001190854 UCSC: chr3:141902549-142058660(-) OLP: chr3:141902549-142058660(-)
NM_019809 UCSC: chr3:141965044-142058660(-) OLP: chr3:141965044-142058660(-)
NM_001190853 UCSC: chr3:141965044-142058660(-) OLP: chr3:141965044-142058660(-)
NM_001190857 UCSC: chr3:141965044-142054814(-) OLP: chr3:141965044-142054814(-)
NM_022554 UCSC: chr3:141965044-142054814(-) OLP: chr3:141965044-142054814(-)
DB links


Entrez 56376
MGI 1927489
Ensembl ENSMUSG00000028273
Featureprotein-coding
GO_BP
  •   2 Terms
      regulation of synapse assembly (GO:0051963)
      regulation of dendritic spine morphogenesis (GO:0061001)
GO_MF
GO_CC
KEGG
Ver2_FPKM
DBTMEEGeneRefSeqEntrezSPR_FPKMOo_FPKM1C_FPKM2C_FPKM4C_FPKMESC_FPKMMEF_FPKMp1C_FPKMp4C_FPKMiPSC_FPKM
2016503
(v2.0)		Pdlim5NM_001190852,NM_001190853,NM_001190854,NM_001190855,NM_001190856,NM_001190857,NM_019808,NM_019809,NM_02255456376
10.98485.37158.8595513.154615.638311.866420.5627.8318813.934212.2955
SPR_Histone_Erkek_5KaroundTSS
DBTMEEGeneEntrezH3.3_1_ChIP/InputH3.3_1(Enrich; log2)H3.3_2_ChIP/InputH3.3_2(Enrich; log2)H3K4me3_1_ChIP/InputH3K4me3_1(Enrich; log2)H3K4me3_2_ChIP/InputH3K4me3_2(Enrich; log2)H3K27me3_1_ChIP/InputH3K27me3_1(Enrich; log2)H3K27me3_2_ChIP/InputH3K27me3_2(Enrich; log2)
2016503
(v2.0)		Pdlim556376
543/3270.2182436/3270.298102/3271.8819226/3270.7936115/3270.5444612/3270.3041
SPR_Histone_Erkek_2KaroundTSS
DBTMEEGeneEntrezH3.3_1_ChIP/InputH3.3_1(Enrich; log2)H3.3_2_ChIP/InputH3.3_2(Enrich; log2)H3K4me3_1_ChIP/InputH3K4me3_1(Enrich; log2)H3K4me3_2_ChIP/InputH3K4me3_2(Enrich; log2)H3K27me3_1_ChIP/InputH3K27me3_1(Enrich; log2)H3K27me3_2_ChIP/InputH3K27me3_2(Enrich; log2)
2016503
(v2.0)		Pdlim556376
322/1570.5207208/1570.288101/1572.8715215/1571.768652/1570.4533244/1570.0365
SPR_Methy_Kobayashi_5KaroundTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level
2016503
(v2.0)		Pdlim556376
46.724414632
SPR_Methy_Kobayashi_2KaroundTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level
2016503
(v2.0)		Pdlim556376
15.56872464.87
SOLiD_OocyteTo4C_FPKM_gene_guided N/A
SOLiD_Illumina_Oo_1C_Sperm_FPKM_gene_guided N/A
SOLiD_Partheno1C_FPKM_gene_guided N/A
SOLiD_Illumina_Oo_p1C_Sperm_FPKM_gene_guided N/A
SOLiD_Partheno4C_FPKM_gene_guided N/A
Illumina_Oo_2C_FPKM_gene_guided N/A
SOLiD_SC_Oo_REPLICA_FPKM_gene_guided N/A
NIA60mer N/A
MOE430 N/A
Agilent44K N/A
Proteome N/A