DBTMEE
Database of Transcriptome in Mouse Early Embryos


Gene Search:

DBTMEE:2016646
GenePhf1
SynonymsD17Ertd455e
mPcl1
PHF2
Tctex-3
Tctex3
DescriptionPHD finger protein 1
LocusNM_009343 UCSC: chr17:27070072-27074835(+) OLP: chr17:27070072-27074835(+)
DB links


Entrez 21652
MGI 98647
Ensembl ENSMUSG00000024193
Featureprotein-coding
GO_BP
  •   6 Terms
      transcription, DNA-templated (GO:0006351)
      regulation of transcription, DNA-templated (GO:0006355)
      cellular response to DNA damage stimulus (GO:0006974)
      chromatin modification (GO:0016568)
      negative regulation of histone H3-K27 methylation (GO:0061086)
      positive regulation of histone H3-K27 methylation (GO:0061087)
GO_MF
GO_CC
KEGG
Ver2_FPKM
DBTMEEGeneRefSeqEntrezSPR_FPKMOo_FPKM1C_FPKM2C_FPKM4C_FPKMESC_FPKMMEF_FPKMp1C_FPKMp4C_FPKMiPSC_FPKM
2016646
(v2.0)		Phf1NM_00934321652
9.94513168.091376.01116.46413.4977.056168.64281480.19821.22148.1012
SPR_Histone_Erkek_5KaroundTSS
DBTMEEGeneEntrezH3.3_1_ChIP/InputH3.3_1(Enrich; log2)H3.3_2_ChIP/InputH3.3_2(Enrich; log2)H3K4me3_1_ChIP/InputH3K4me3_1(Enrich; log2)H3K4me3_2_ChIP/InputH3K4me3_2(Enrich; log2)H3K27me3_1_ChIP/InputH3K27me3_1(Enrich; log2)H3K27me3_2_ChIP/InputH3K27me3_2(Enrich; log2)
2016646
(v2.0)		Phf121652
761/4570.2224402/457-0.3005720/4574.22111880/4573.364611/457-3.2064106/457-2.6902
SPR_Histone_Erkek_2KaroundTSS
DBTMEEGeneEntrezH3.3_1_ChIP/InputH3.3_1(Enrich; log2)H3.3_2_ChIP/InputH3.3_2(Enrich; log2)H3K4me3_1_ChIP/InputH3K4me3_1(Enrich; log2)H3K4me3_2_ChIP/InputH3K4me3_2(Enrich; log2)H3K27me3_1_ChIP/InputH3K27me3_1(Enrich; log2)H3K27me3_2_ChIP/InputH3K27me3_2(Enrich; log2)
2016646
(v2.0)		Phf121652
399/2040.4531213/204-0.0536572/2045.00771343/2044.03353/204-3.643852/204-2.537
SPR_Methy_Kobayashi_5KaroundTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level
2016646
(v2.0)		Phf121652
115.41117665.57
SPR_Methy_Kobayashi_2KaroundTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level
2016646
(v2.0)		Phf121652
34.27069137.66
SOLiD_OocyteTo4C_FPKM_gene_guided N/A
SOLiD_Illumina_Oo_1C_Sperm_FPKM_gene_guided N/A
SOLiD_Partheno1C_FPKM_gene_guided N/A
SOLiD_Illumina_Oo_p1C_Sperm_FPKM_gene_guided N/A
SOLiD_Partheno4C_FPKM_gene_guided N/A
Illumina_Oo_2C_FPKM_gene_guided N/A
SOLiD_SC_Oo_REPLICA_FPKM_gene_guided N/A
NIA60mer N/A
MOE430 N/A
Agilent44K N/A
Proteome N/A