DBTMEE
Database of Transcriptome in Mouse Early Embryos


Gene Search:

DBTMEE:2017584
GenePsma6
Synonyms
Descriptionproteasome (prosome, macropain) subunit, alpha type 6
LocusNM_011968 UCSC: chr12:56499812-56519446(+) OLP: chr12:56499812-56519446(+)
DB links


Entrez 26443
MGI 1347006
Ensembl ENSMUSG00000021024
Vega OTTMUSG00000034926
Featureprotein-coding
GO_BP
  •   5 Terms
      proteolysis (GO:0006508)
      ubiquitin-dependent protein catabolic process (GO:0006511)
      skeletal muscle tissue development (GO:0007519)
      positive regulation of NF-kappaB transcription factor activity (GO:0051092)
      proteolysis involved in cellular protein catabolic process (GO:0051603)
GO_MF
GO_CC
KEGG
Ver2_FPKM
DBTMEEGeneRefSeqEntrezSPR_FPKMOo_FPKM1C_FPKM2C_FPKM4C_FPKMESC_FPKMMEF_FPKMp1C_FPKMp4C_FPKMiPSC_FPKM
2017584
(v2.0)		Psma6NM_01196826443
305.085105.36153.7111238.441410.41389.850885.378459.5656363.704109.07
SPR_Histone_Erkek_5KaroundTSS
DBTMEEGeneEntrezH3.3_1_ChIP/InputH3.3_1(Enrich; log2)H3.3_2_ChIP/InputH3.3_2(Enrich; log2)H3K4me3_1_ChIP/InputH3K4me3_1(Enrich; log2)H3K4me3_2_ChIP/InputH3K4me3_2(Enrich; log2)H3K27me3_1_ChIP/InputH3K27me3_1(Enrich; log2)H3K27me3_2_ChIP/InputH3K27me3_2(Enrich; log2)
2017584
(v2.0)		Psma626443
631/3820.2107421/3820.024120/3821.8974373/3821.291337/382-1.2874213/382-1.4356
SPR_Histone_Erkek_2KaroundTSS
DBTMEEGeneEntrezH3.3_1_ChIP/InputH3.3_1(Enrich; log2)H3.3_2_ChIP/InputH3.3_2(Enrich; log2)H3K4me3_1_ChIP/InputH3K4me3_1(Enrich; log2)H3K4me3_2_ChIP/InputH3K4me3_2(Enrich; log2)H3K27me3_1_ChIP/InputH3K27me3_1(Enrich; log2)H3K27me3_2_ChIP/InputH3K27me3_2(Enrich; log2)
2017584
(v2.0)		Psma626443
316/1960.1754190/196-0.1602108/1962.6679341/1962.11612/196-1.886874/196-1.9827
SPR_Methy_Kobayashi_5KaroundTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level
2017584
(v2.0)		Psma626443
58.554413543.37
SPR_Methy_Kobayashi_2KaroundTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level
2017584
(v2.0)		Psma626443
15.71477620.68
SOLiD_OocyteTo4C_FPKM_gene_guided N/A
SOLiD_Illumina_Oo_1C_Sperm_FPKM_gene_guided N/A
SOLiD_Partheno1C_FPKM_gene_guided N/A
SOLiD_Illumina_Oo_p1C_Sperm_FPKM_gene_guided N/A
SOLiD_Partheno4C_FPKM_gene_guided N/A
Illumina_Oo_2C_FPKM_gene_guided N/A
SOLiD_SC_Oo_REPLICA_FPKM_gene_guided N/A
NIA60mer
DBTMEEArray_Feature_NumberOligo_Parent_CloneUnigeneGeneEntrezU_ClusterNAP_ClusterGene_U/NAPTIGRSwissProtESTOo1C2C4C8CMorulaBlastocyst
0017083
(v1.0)		6139H3018D12-3Mm.30210Psma626443
U013964NAP011372-001Psma6;TC919096,TC919093,TC919089,TC919087Q9QUM9U,F,23.15933.34353.88464.3214.24134.3924.2992
MOE430 N/A
Agilent44K N/A
Proteome N/A