DBTMEE

DBTMEE
Database of Transcriptome in Mouse Early Embryos

DBTMEE:2017692

Gene

Ptp4a2

Synonyms

Prl-2

Description

protein tyrosine phosphatase 4a2

Locus

NM_008974 UCSC: chr4:129497723-129527247(+) OLP: chr4:129497723-129527247(+)
NM_001164745 UCSC: chr4:129497952-129527247(+) OLP: chr4:129497952-129527247(+)

DB links

Entrez 19244
MGI 1277117
Ensembl ENSMUSG00000028788
Vega OTTMUSG00000009511

Feature

protein-coding

GO_BP

2 Terms

GO_MF

4 Terms

GO_CC

5 Terms

KEGG

DBTMEE	Gene	RefSeq	Entrez	SPR_FPKM	Oo_FPKM	1C_FPKM	2C_FPKM	4C_FPKM	ESC_FPKM	MEF_FPKM	p1C_FPKM	p4C_FPKM	iPSC_FPKM
2017692 (v2.0)	Ptp4a2	NM_001164745,NM_008974	19244	86.8242	103.025	158.547	157.205	147.44	75.1715	54.8984	122.999	111.049	82.328

SPR_Histone_Erkek_5KaroundTSS

DBTMEE	Gene	Entrez	H3.3_1_ChIP/Input	H3.3_1(Enrich; log2)	H3.3_2_ChIP/Input	H3.3_2(Enrich; log2)	H3K4me3_1_ChIP/Input	H3K4me3_1(Enrich; log2)	H3K4me3_2_ChIP/Input	H3K4me3_2(Enrich; log2)	H3K27me3_1_ChIP/Input	H3K27me3_1(Enrich; log2)	H3K27me3_2_ChIP/Input	H3K27me3_2(Enrich; log2)
2017692 (v2.0)	Ptp4a2	19244	646/427	0.0843	396/427	-0.2244	179/427	2.3144	524/427	1.6209	7/427	-3.6943	98/427	-2.704

SPR_Histone_Erkek_2KaroundTSS

DBTMEE	Gene	Entrez	H3.3_1_ChIP/Input	H3.3_1(Enrich; log2)	H3.3_2_ChIP/Input	H3.3_2(Enrich; log2)	H3K4me3_1_ChIP/Input	H3K4me3_1(Enrich; log2)	H3K4me3_2_ChIP/Input	H3K4me3_2(Enrich; log2)	H3K27me3_1_ChIP/Input	H3K27me3_1(Enrich; log2)	H3K27me3_2_ChIP/Input	H3K27me3_2(Enrich; log2)
2017692 (v2.0)	Ptp4a2	19244	346/169	0.5184	197/169	0.1044	164/169	3.4665	474/169	2.8009	2/169	-3.7932	41/169	-2.5988

SPR_Methy_Kobayashi_5KaroundTSS

DBTMEE	Gene	Entrez	Total_mC_levels	Number_of_mCs	Averaged_Methylation_level
2017692 (v2.0)	Ptp4a2	19244	62.5684	150	41.71

SPR_Methy_Kobayashi_2KaroundTSS

DBTMEE	Gene	Entrez	Total_mC_levels	Number_of_mCs	Averaged_Methylation_level
2017692 (v2.0)	Ptp4a2	19244	14.1336	92	15.36

SOLiD_OocyteTo4C_FPKM_gene_guided

N/A

SOLiD_Illumina_Oo_1C_Sperm_FPKM_gene_guided

N/A

SOLiD_Partheno1C_FPKM_gene_guided

N/A

SOLiD_Illumina_Oo_p1C_Sperm_FPKM_gene_guided

N/A

SOLiD_Partheno4C_FPKM_gene_guided

N/A

Illumina_Oo_2C_FPKM_gene_guided

N/A

SOLiD_SC_Oo_REPLICA_FPKM_gene_guided

N/A

DBTMEE	Array_Feature_Number	Oligo_Parent_Clone	Unigene	Gene	Entrez	U_Cluster	NAP_Cluster	Gene_U/NAP	TIGR	SwissProt	EST	Oo	1C	2C	4C	8C	Morula	Blastocyst
0017186 (v1.0)	11881	H3126D09-3	Mm.6355	Ptp4a2	19244	U004875	NAP120946-001	Ptp4a2;	TC885861,TC885858,TC885853,TC885848	O70274	U,F,2	4.6218	4.6457	4.1477	4.5522	4.4079	4.5194	4.4493

N/A

N/A

N/A