DBTMEE
Database of Transcriptome in Mouse Early Embryos


Gene Search:

DBTMEE:2017758
GenePus7
Synonyms
Descriptionpseudouridylate synthase 7 homolog (S. cerevisiae)
LocusNM_001289781 UCSC: chr5:23245983-23285481(-) OLP: chr5:23245983-23285481(-)
NM_001289780 UCSC: chr5:23245983-23289529(-) OLP: chr5:23245983-23289529(-)
NM_178403 UCSC: chr5:23245983-23289529(-) OLP: chr5:23245983-23289529(-)
DB links


Entrez 78697
MGI 1925947
Ensembl ENSMUSG00000057541
Vega OTTMUSG00000028491
Featureprotein-coding
GO_BP
GO_MF
GO_CC
KEGG
Ver2_FPKM
Log10 (FPKM+1)
0.536
SPR
1.015
Oo
1.12
1C
1.516
2C
1.371
4C
0.817
ESC
1.126
MEF
1.12
p1C
1.289
p4C
0.835
iPSC
DBTMEEGeneRefSeqEntrezSPR_FPKMOo_FPKM1C_FPKM2C_FPKM4C_FPKMESC_FPKMMEF_FPKMp1C_FPKMp4C_FPKMiPSC_FPKM
2017758
(v2.0)		Pus7NM_001289780,NM_001289781,NM_17840378697
2.434319.3544912.182431.779622.5095.5652312.353312.174918.43595.83192
SPR_Histone_Erkek_5KaroundTSS
Enrichment of Histone Variant and Modification (+/- 5Kb from TSS)
0.198
H3.3
Rep.1
-0.063
H3.3
Rep.2
2.082
H3K4me3
Rep.1
1.376
H3K4me3
Rep.2
0.292
H3K27me3
Rep.1
-0.164
H3K27me3
Rep.2
DBTMEEGeneEntrezH3.3_1_ChIP/InputH3.3_1(Enrich; log2)H3.3_2_ChIP/InputH3.3_2(Enrich; log2)H3K4me3_1_ChIP/InputH3K4me3_1(Enrich; log2)H3K4me3_2_ChIP/InputH3K4me3_2(Enrich; log2)H3K27me3_1_ChIP/InputH3K27me3_1(Enrich; log2)H3K27me3_2_ChIP/InputH3K27me3_2(Enrich; log2)
2017758
(v2.0)		Pus778697
745/4550.1981472/455-0.0631162/4552.0821471/4551.3762134/4550.2917615/455-0.1642
SPR_Histone_Erkek_2KaroundTSS
Enrichment of Histone Variant and Modification (+/- 2Kb from TSS)
0.434
H3.3
Rep.1
0.268
H3.3
Rep.2
2.657
H3K4me3
Rep.1
2.199
H3K4me3
Rep.2
1.215
H3K27me3
Rep.1
0.774
H3K27me3
Rep.2
DBTMEEGeneEntrezH3.3_1_ChIP/InputH3.3_1(Enrich; log2)H3.3_2_ChIP/InputH3.3_2(Enrich; log2)H3K4me3_1_ChIP/InputH3K4me3_1(Enrich; log2)H3K4me3_2_ChIP/InputH3K4me3_2(Enrich; log2)H3K27me3_1_ChIP/InputH3K27me3_1(Enrich; log2)H3K27me3_2_ChIP/InputH3K27me3_2(Enrich; log2)
2017758
(v2.0)		Pus778697
359/1860.4339243/1860.2681102/1862.6572343/1862.199105/1861.2146483/1860.7742
SPR_Methy_Kobayashi_5KaroundTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level
2017758
(v2.0)		Pus778697
58.069616934.36
SPR_Methy_Kobayashi_2KaroundTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level
2017758
(v2.0)		Pus778697
22.26698925.02
SOLiD_OocyteTo4C_FPKM_gene_guided N/A
SOLiD_Illumina_Oo_1C_Sperm_FPKM_gene_guided N/A
SOLiD_Partheno1C_FPKM_gene_guided N/A
SOLiD_Illumina_Oo_p1C_Sperm_FPKM_gene_guided N/A
SOLiD_Partheno4C_FPKM_gene_guided N/A
Illumina_Oo_2C_FPKM_gene_guided N/A
SOLiD_SC_Oo_REPLICA_FPKM_gene_guided N/A
NIA60mer N/A
MOE430 N/A
Agilent44K N/A
Proteome N/A