DBTMEE
Database of Transcriptome in Mouse Early Embryos


Gene Search:

DBTMEE:2017841
GeneRab21
Synonyms
DescriptionRAB21, member RAS oncogene family
LocusNM_024454 UCSC: chr10:114726918-114752647(-) OLP: chr10:114726918-114752647(-)
DB links


Entrez 216344
MGI 894308
Ensembl ENSMUSG00000020132
Featureprotein-coding
GO_BP
GO_MF
GO_CC
KEGG
Ver2_FPKM
Log10 (FPKM+1)
1.384
SPR
1.91
Oo
2.033
1C
1.292
2C
1.039
4C
1.057
ESC
1.086
MEF
1.98
p1C
1.055
p4C
1.064
iPSC
DBTMEEGeneRefSeqEntrezSPR_FPKMOo_FPKM1C_FPKM2C_FPKM4C_FPKMESC_FPKMMEF_FPKMp1C_FPKMp4C_FPKMiPSC_FPKM
2017841
(v2.0)		Rab21NM_024454216344
23.190580.3257106.8718.58499.9365410.400411.196694.445910.339810.5852
SPR_Histone_Erkek_5KaroundTSS
Enrichment of Histone Variant and Modification (+/- 5Kb from TSS)
0.249
H3.3
Rep.1
-0.157
H3.3
Rep.2
2.362
H3K4me3
Rep.1
1.613
H3K4me3
Rep.2
-2.561
H3K27me3
Rep.1
-1.703
H3K27me3
Rep.2
DBTMEEGeneEntrezH3.3_1_ChIP/InputH3.3_1(Enrich; log2)H3.3_2_ChIP/InputH3.3_2(Enrich; log2)H3K4me3_1_ChIP/InputH3K4me3_1(Enrich; log2)H3K4me3_2_ChIP/InputH3K4me3_2(Enrich; log2)H3K27me3_1_ChIP/InputH3K27me3_1(Enrich; log2)H3K27me3_2_ChIP/InputH3K27me3_2(Enrich; log2)
2017841
(v2.0)		Rab21216344
660/3890.2493378/389-0.1572169/3892.3625475/3891.613215/389-2.5612180/389-1.7027
SPR_Histone_Erkek_2KaroundTSS
Enrichment of Histone Variant and Modification (+/- 2Kb from TSS)
0.691
H3.3
Rep.1
0.124
H3.3
Rep.2
3.427
H3K4me3
Rep.1
2.688
H3K4me3
Rep.2
-2.537
H3K27me3
Rep.1
-1.941
H3K27me3
Rep.2
DBTMEEGeneEntrezH3.3_1_ChIP/InputH3.3_1(Enrich; log2)H3.3_2_ChIP/InputH3.3_2(Enrich; log2)H3K4me3_1_ChIP/InputH3K4me3_1(Enrich; log2)H3K4me3_2_ChIP/InputH3K4me3_2(Enrich; log2)H3K27me3_1_ChIP/InputH3K27me3_1(Enrich; log2)H3K27me3_2_ChIP/InputH3K27me3_2(Enrich; log2)
2017841
(v2.0)		Rab21216344
381/1650.6912195/1650.1241156/1653.427428/1652.6886/165-2.537164/165-1.9406
SPR_Methy_Kobayashi_5KaroundTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level
2017841
(v2.0)		Rab21216344
83.350716849.61
SPR_Methy_Kobayashi_2KaroundTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level
2017841
(v2.0)		Rab21216344
24.347810523.19
SOLiD_OocyteTo4C_FPKM_gene_guided N/A
SOLiD_Illumina_Oo_1C_Sperm_FPKM_gene_guided N/A
SOLiD_Partheno1C_FPKM_gene_guided N/A
SOLiD_Illumina_Oo_p1C_Sperm_FPKM_gene_guided N/A
SOLiD_Partheno4C_FPKM_gene_guided N/A
Illumina_Oo_2C_FPKM_gene_guided N/A
SOLiD_SC_Oo_REPLICA_FPKM_gene_guided N/A
NIA60mer N/A
MOE430 N/A
Agilent44K N/A
Proteome N/A