DBTMEE
Database of Transcriptome in Mouse Early Embryos


Gene Search:

DBTMEE:2017970
GeneRap1gds1
SynonymsGDS1
DescriptionRAP1, GTP-GDP dissociation stimulator 1
LocusNM_145544 UCSC: chr3:138588861-138738165(-) OLP: chr3:138588861-138738165(-)
NM_001040690 UCSC: chr3:138588861-138738165(-) OLP: chr3:138588861-138738165(-)
NM_001286759 UCSC: chr3:138588861-138738165(-) OLP: chr3:138588861-138738165(-)
DB links


Entrez 229877
MGI 2385189
Ensembl ENSMUSG00000028149
Featureprotein-coding
GO_BP
  •   5 Terms
      vascular smooth muscle contraction (GO:0014829)
      myosin filament assembly (GO:0031034)
      positive regulation of Rho GTPase activity (GO:0032321)
      negative regulation of endoplasmic reticulum calcium ion concentration (GO:0032471)
      positive regulation of mitochondrial calcium ion concentration (GO:0051561)
GO_MF
GO_CC
KEGG
Ver2_FPKM
DBTMEEGeneRefSeqEntrezSPR_FPKMOo_FPKM1C_FPKM2C_FPKM4C_FPKMESC_FPKMMEF_FPKMp1C_FPKMp4C_FPKMiPSC_FPKM
2017970
(v2.0)		Rap1gds1NM_001040690,NM_001286759,NM_145544229877
20.258516.121227.655820.161511.32158.6666417.09227.693312.07729.78405
SPR_Histone_Erkek_5KaroundTSS
DBTMEEGeneEntrezH3.3_1_ChIP/InputH3.3_1(Enrich; log2)H3.3_2_ChIP/InputH3.3_2(Enrich; log2)H3K4me3_1_ChIP/InputH3K4me3_1(Enrich; log2)H3K4me3_2_ChIP/InputH3K4me3_2(Enrich; log2)H3K27me3_1_ChIP/InputH3K27me3_1(Enrich; log2)H3K27me3_2_ChIP/InputH3K27me3_2(Enrich; log2)
2017970
(v2.0)		Rap1gds1229877
701/3680.4159547/3680.4546123/3681.9849371/3681.337148/3680.7372826/3680.5658
SPR_Histone_Erkek_2KaroundTSS
DBTMEEGeneEntrezH3.3_1_ChIP/InputH3.3_1(Enrich; log2)H3.3_2_ChIP/InputH3.3_2(Enrich; log2)H3K4me3_1_ChIP/InputH3K4me3_1(Enrich; log2)H3K4me3_2_ChIP/InputH3K4me3_2(Enrich; log2)H3K27me3_1_ChIP/InputH3K27me3_1(Enrich; log2)H3K27me3_2_ChIP/InputH3K27me3_2(Enrich; log2)
2017970
(v2.0)		Rap1gds1229877
393/1610.7709256/1610.55123/1613.1195339/1612.3874104/1611.4043571/1611.222
SPR_Methy_Kobayashi_5KaroundTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level
2017970
(v2.0)		Rap1gds1229877
51.577714036.84
SPR_Methy_Kobayashi_2KaroundTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level
2017970
(v2.0)		Rap1gds1229877
2.7479863.2
SOLiD_OocyteTo4C_FPKM_gene_guided N/A
SOLiD_Illumina_Oo_1C_Sperm_FPKM_gene_guided N/A
SOLiD_Partheno1C_FPKM_gene_guided N/A
SOLiD_Illumina_Oo_p1C_Sperm_FPKM_gene_guided N/A
SOLiD_Partheno4C_FPKM_gene_guided N/A
Illumina_Oo_2C_FPKM_gene_guided N/A
SOLiD_SC_Oo_REPLICA_FPKM_gene_guided N/A
NIA60mer N/A
MOE430 N/A
Agilent44K N/A
Proteome N/A