DBTMEE
Database of Transcriptome in Mouse Early Embryos


Gene Search:

DBTMEE:2017975
GeneRapgef2
SynonymsCNRasGEF
nRapGEP
Pdzgef1
RA-GEF-1
DescriptionRap guanine nucleotide exchange factor (GEF) 2
LocusNM_001099624 UCSC: chr3:78866451-78949797(-) OLP: chr3:78866451-78949797(-)
DB links


Entrez 76089
MGI 2659071
Ensembl ENSMUSG00000062232
Vega OTTMUSG00000031912
Featureprotein-coding
GO_BP
  •   38 Terms
      blood vessel development (GO:0001568)
      neuron migration (GO:0001764)
      signal transduction (GO:0007165)
      G-protein coupled receptor signaling pathway (GO:0007186)
      neuropeptide signaling pathway (GO:0007218)
      small GTPase mediated signal transduction (GO:0007264)
      multicellular organismal development (GO:0007275)
      nervous system development (GO:0007399)
      negative regulation of cell proliferation (GO:0008285)
      positive regulation of neuron projection development (GO:0010976)
      cAMP-mediated signaling (GO:0019933)
      ventricular system development (GO:0021591)
      forebrain neuron development (GO:0021884)
      cell differentiation (GO:0030154)
      neuron projection development (GO:0031175)
      brain-derived neurotrophic factor receptor signaling pathway (GO:0031547)
      positive regulation of protein binding (GO:0032092)
      positive regulation of Ras GTPase activity (GO:0032320)
      Rap protein signal transduction (GO:0032486)
      positive regulation of Rap GTPase activity (GO:0032854)
      nerve growth factor signaling pathway (GO:0038180)
      positive regulation of cAMP-mediated signaling (GO:0043950)
      positive regulation of protein kinase activity (GO:0045860)
      negative regulation of melanin biosynthetic process (GO:0048022)
      regulation of synaptic plasticity (GO:0048167)
      negative regulation of dendrite morphogenesis (GO:0050774)
      regulation of small GTPase mediated signal transduction (GO:0051056)
      establishment of endothelial barrier (GO:0061028)
      positive regulation of ERK1 and ERK2 cascade (GO:0070374)
      cellular response to cAMP (GO:0071320)
      cellular response to cGMP (GO:0071321)
      adenylate cyclase-activating adrenergic receptor signaling pathway (GO:0071880)
      regulation of cell junction assembly (GO:1901888)
      cellular response to nerve growth factor stimulus (GO:1990090)
      positive regulation of cAMP-dependent protein kinase activity (GO:2000481)
      positive regulation of dendritic cell apoptotic process (GO:2000670)
      positive regulation of vasculogenesis (GO:2001214)
      positive regulation of neuron migration (GO:2001224)
GO_MF
GO_CC
KEGG
  •   1 Terms
Ver2_FPKM
DBTMEEGeneRefSeqEntrezSPR_FPKMOo_FPKM1C_FPKM2C_FPKM4C_FPKMESC_FPKMMEF_FPKMp1C_FPKMp4C_FPKMiPSC_FPKM
2017975
(v2.0)		Rapgef2NM_00109962476089
3.7753511.037914.73645.964425.318062.075459.8854314.54346.092412.24198
SPR_Histone_Erkek_5KaroundTSS
DBTMEEGeneEntrezH3.3_1_ChIP/InputH3.3_1(Enrich; log2)H3.3_2_ChIP/InputH3.3_2(Enrich; log2)H3K4me3_1_ChIP/InputH3K4me3_1(Enrich; log2)H3K4me3_2_ChIP/InputH3K4me3_2(Enrich; log2)H3K27me3_1_ChIP/InputH3K27me3_1(Enrich; log2)H3K27me3_2_ChIP/InputH3K27me3_2(Enrich; log2)
2017975
(v2.0)		Rapgef276089
545/437-0.1937402/437-0.236112/437-1.509527/437-2.641130/437-1.7732273/437-1.2734
SPR_Histone_Erkek_2KaroundTSS
DBTMEEGeneEntrezH3.3_1_ChIP/InputH3.3_1(Enrich; log2)H3.3_2_ChIP/InputH3.3_2(Enrich; log2)H3K4me3_1_ChIP/InputH3K4me3_1(Enrich; log2)H3K4me3_2_ChIP/InputH3K4me3_2(Enrich; log2)H3K27me3_1_ChIP/InputH3K27me3_1(Enrich; log2)H3K27me3_2_ChIP/InputH3K27me3_2(Enrich; log2)
2017975
(v2.0)		Rapgef276089
234/186-0.1806176/186-0.19486/186-1.221910/186-2.767811/186-1.9283140/186-1.0014
SPR_Methy_Kobayashi_5KaroundTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level
2017975
(v2.0)		Rapgef276089
110.5811695.33
SPR_Methy_Kobayashi_2KaroundTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level
2017975
(v2.0)		Rapgef276089
48.06365096.13
SOLiD_OocyteTo4C_FPKM_gene_guided N/A
SOLiD_Illumina_Oo_1C_Sperm_FPKM_gene_guided N/A
SOLiD_Partheno1C_FPKM_gene_guided N/A
SOLiD_Illumina_Oo_p1C_Sperm_FPKM_gene_guided N/A
SOLiD_Partheno4C_FPKM_gene_guided N/A
Illumina_Oo_2C_FPKM_gene_guided N/A
SOLiD_SC_Oo_REPLICA_FPKM_gene_guided N/A
NIA60mer N/A
MOE430 N/A
Agilent44K N/A
Proteome N/A