DBTMEE
Database of Transcriptome in Mouse Early Embryos


Gene Search:

DBTMEE:2017979
GeneRapgef6
SynonymsPDZ-GEF2
Pdzgef2
RA-GEF-2
DescriptionRap guanine nucleotide exchange factor (GEF) 6
LocusNM_001252494 UCSC: chr11:54336347-54512788(+) OLP: chr11:54336347-54512788(+)
NM_001252496 UCSC: chr11:54336347-54512788(+) OLP: chr11:54336347-54512788(+)
NM_175258 UCSC: chr11:54336347-54512788(+) OLP: chr11:54336347-54512788(+)
NM_001252498 UCSC: chr11:54409648-54452366(+) OLP: chr11:54409648-54452366(+)
NM_001252497 UCSC: chr11:54409648-54462966(+) OLP: chr11:54409648-54462966(+)
DB links


Entrez 192786
MGI 2384761
Ensembl ENSMUSG00000037533
Vega OTTMUSG00000005672
Featureprotein-coding
GO_BP
  •   1 Terms
GO_MF
GO_CC
KEGG
Ver2_FPKM
DBTMEEGeneRefSeqEntrezSPR_FPKMOo_FPKM1C_FPKM2C_FPKM4C_FPKMESC_FPKMMEF_FPKMp1C_FPKMp4C_FPKMiPSC_FPKM
2017979
(v2.0)		Rapgef6NM_001252494,NM_001252496,NM_001252497,NM_001252498,NM_175258192786
8.364148.7927613.524818.395814.43863.8842315.562210.287814.3983.34454
SPR_Histone_Erkek_5KaroundTSS
DBTMEEGeneEntrezH3.3_1_ChIP/InputH3.3_1(Enrich; log2)H3.3_2_ChIP/InputH3.3_2(Enrich; log2)H3K4me3_1_ChIP/InputH3K4me3_1(Enrich; log2)H3K4me3_2_ChIP/InputH3K4me3_2(Enrich; log2)H3K27me3_1_ChIP/InputH3K27me3_1(Enrich; log2)H3K27me3_2_ChIP/InputH3K27me3_2(Enrich; log2)
2017979
(v2.0)		Rapgef6192786
666/3580.3818566/3580.5434714/3584.5512776/3584.276721/358-1.983378/358-2.774
SPR_Histone_Erkek_2KaroundTSS
DBTMEEGeneEntrezH3.3_1_ChIP/InputH3.3_1(Enrich; log2)H3.3_2_ChIP/InputH3.3_2(Enrich; log2)H3K4me3_1_ChIP/InputH3K4me3_1(Enrich; log2)H3K4me3_2_ChIP/InputH3K4me3_2(Enrich; log2)H3K27me3_1_ChIP/InputH3K27me3_1(Enrich; log2)H3K27me3_2_ChIP/InputH3K27me3_2(Enrich; log2)
2017979
(v2.0)		Rapgef6192786
342/1930.3111266/1930.345602/1935.15671946/1934.64729/193-2.243534/193-3.0489
SPR_Methy_Kobayashi_5KaroundTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level
2017979
(v2.0)		Rapgef6192786
27.139611224.23
SPR_Methy_Kobayashi_2KaroundTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level
2017979
(v2.0)		Rapgef6192786
8.8434939.51
SOLiD_OocyteTo4C_FPKM_gene_guided N/A
SOLiD_Illumina_Oo_1C_Sperm_FPKM_gene_guided N/A
SOLiD_Partheno1C_FPKM_gene_guided N/A
SOLiD_Illumina_Oo_p1C_Sperm_FPKM_gene_guided N/A
SOLiD_Partheno4C_FPKM_gene_guided N/A
Illumina_Oo_2C_FPKM_gene_guided N/A
SOLiD_SC_Oo_REPLICA_FPKM_gene_guided N/A
NIA60mer N/A
MOE430 N/A
Agilent44K N/A
Proteome N/A