DBTMEE
Database of Transcriptome in Mouse Early Embryos


Gene Search:

DBTMEE:2018108
GeneRc3h1
Synonymsroquin
DescriptionRING CCCH (C3H) domains 1
LocusNM_001024952 UCSC: chr1:162836542-162905107(+) OLP: chr1:162836542-162905107(+)
DB links


Entrez 381305
MGI 2685397
Ensembl ENSMUSG00000040423
Vega OTTMUSG00000034799
Featureprotein-coding
GO_BP
  •   18 Terms
      nuclear-transcribed mRNA catabolic process (GO:0000956)
      B cell homeostasis (GO:0001782)
      regulation of germinal center formation (GO:0002634)
      negative regulation of germinal center formation (GO:0002635)
      regulation of gene expression (GO:0010468)
      posttranscriptional regulation of gene expression (GO:0010608)
      negative regulation of B cell proliferation (GO:0030889)
      cytoplasmic mRNA processing body assembly (GO:0033962)
      T cell proliferation (GO:0042098)
      T cell homeostasis (GO:0043029)
      regulation of mRNA stability (GO:0043488)
      negative regulation of T-helper cell differentiation (GO:0045623)
      negative regulation of activated T cell proliferation (GO:0046007)
      lymph node development (GO:0048535)
      spleen development (GO:0048536)
      regulation of T cell receptor signaling pathway (GO:0050856)
      T follicular helper cell differentiation (GO:0061470)
      positive regulation of NIK/NF-kappaB signaling (GO:1901224)
GO_MF
GO_CC
KEGG
Ver2_FPKM
DBTMEEGeneRefSeqEntrezSPR_FPKMOo_FPKM1C_FPKM2C_FPKM4C_FPKMESC_FPKMMEF_FPKMp1C_FPKMp4C_FPKMiPSC_FPKM
2018108
(v2.0)		Rc3h1NM_001024952381305
2.602269.9042521.865525.867926.14823.1813817.098221.018925.17343.04317
SPR_Histone_Erkek_5KaroundTSS
DBTMEEGeneEntrezH3.3_1_ChIP/InputH3.3_1(Enrich; log2)H3.3_2_ChIP/InputH3.3_2(Enrich; log2)H3K4me3_1_ChIP/InputH3K4me3_1(Enrich; log2)H3K4me3_2_ChIP/InputH3K4me3_2(Enrich; log2)H3K27me3_1_ChIP/InputH3K27me3_1(Enrich; log2)H3K27me3_2_ChIP/InputH3K27me3_2(Enrich; log2)
2018108
(v2.0)		Rc3h1381305
738/3350.6251540/3350.5712570/3354.31911519/3353.502392/3350.1911569/3350.1645
SPR_Histone_Erkek_2KaroundTSS
DBTMEEGeneEntrezH3.3_1_ChIP/InputH3.3_1(Enrich; log2)H3.3_2_ChIP/InputH3.3_2(Enrich; log2)H3K4me3_1_ChIP/InputH3K4me3_1(Enrich; log2)H3K4me3_2_ChIP/InputH3K4me3_2(Enrich; log2)H3K27me3_1_ChIP/InputH3K27me3_1(Enrich; log2)H3K27me3_2_ChIP/InputH3K27me3_2(Enrich; log2)
2018108
(v2.0)		Rc3h1381305
434/1441.0736270/1440.7865551/1445.42291351/1444.537219/144-0.8313140/144-0.6344
SPR_Methy_Kobayashi_5KaroundTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level
2018108
(v2.0)		Rc3h1381305
38.93238645.27
SPR_Methy_Kobayashi_2KaroundTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level
2018108
(v2.0)		Rc3h1381305
6.01464912.27
SOLiD_OocyteTo4C_FPKM_gene_guided N/A
SOLiD_Illumina_Oo_1C_Sperm_FPKM_gene_guided N/A
SOLiD_Partheno1C_FPKM_gene_guided N/A
SOLiD_Illumina_Oo_p1C_Sperm_FPKM_gene_guided N/A
SOLiD_Partheno4C_FPKM_gene_guided N/A
Illumina_Oo_2C_FPKM_gene_guided N/A
SOLiD_SC_Oo_REPLICA_FPKM_gene_guided N/A
NIA60mer N/A
MOE430 N/A
Agilent44K N/A
Proteome N/A