DBTMEE
Database of Transcriptome in Mouse Early Embryos


Gene Search:

DBTMEE:2018145
GeneRdx
Synonyms
Descriptionradixin
LocusNM_001104616 UCSC: chr9:51855255-51896843(+) OLP: chr9:51855255-51896843(+)
NM_009041 UCSC: chr9:51856046-51896843(+) OLP: chr9:51856046-51896843(+)
NM_001104617 UCSC: chr9:51856046-51883282(+) OLP: chr9:51856046-51883282(+)
DB links


Entrez 19684
MGI 97887
Ensembl ENSMUSG00000032050
Featureprotein-coding
GO_BP
GO_MF
GO_CC
KEGG
  •   1 Terms
      Regulation of actin cytoskeleton (mmu04810)
Ver2_FPKM
Log10 (FPKM+1)
1.346
SPR
2.84
Oo
2.174
1C
1.832
2C
1.687
4C
1.631
ESC
1.784
MEF
2.005
p1C
1.845
p4C
1.593
iPSC
DBTMEEGeneRefSeqEntrezSPR_FPKMOo_FPKM1C_FPKM2C_FPKM4C_FPKMESC_FPKMMEF_FPKMp1C_FPKMp4C_FPKMiPSC_FPKM
2018145
(v2.0)		RdxNM_001104616,NM_001104617,NM_00904119684
21.1871691.496148.17266.966947.615941.754659.8819100.25768.93238.1496
SPR_Histone_Erkek_5KaroundTSS
Enrichment of Histone Variant and Modification (+/- 5Kb from TSS)
0.385
H3.3
Rep.1
0.311
H3.3
Rep.2
2.315
H3K4me3
Rep.1
1.144
H3K4me3
Rep.2
0.393
H3K27me3
Rep.1
0.409
H3K27me3
Rep.2
DBTMEEGeneEntrezH3.3_1_ChIP/InputH3.3_1(Enrich; log2)H3.3_2_ChIP/InputH3.3_2(Enrich; log2)H3K4me3_1_ChIP/InputH3K4me3_1(Enrich; log2)H3K4me3_2_ChIP/InputH3K4me3_2(Enrich; log2)H3K27me3_1_ChIP/InputH3K27me3_1(Enrich; log2)H3K27me3_2_ChIP/InputH3K27me3_2(Enrich; log2)
2018145
(v2.0)		Rdx19684
755/4050.3849545/4050.3114170/4052.3146357/4051.1444128/4050.3925815/4050.4086
SPR_Histone_Erkek_2KaroundTSS
Enrichment of Histone Variant and Modification (+/- 2Kb from TSS)
0.918
H3.3
Rep.1
0.683
H3.3
Rep.2
3.362
H3K4me3
Rep.1
2.074
H3K4me3
Rep.2
0.378
H3K27me3
Rep.1
0.235
H3K27me3
Rep.2
DBTMEEGeneEntrezH3.3_1_ChIP/InputH3.3_1(Enrich; log2)H3.3_2_ChIP/InputH3.3_2(Enrich; log2)H3K4me3_1_ChIP/InputH3K4me3_1(Enrich; log2)H3K4me3_2_ChIP/InputH3K4me3_2(Enrich; log2)H3K27me3_1_ChIP/InputH3K27me3_1(Enrich; log2)H3K27me3_2_ChIP/InputH3K27me3_2(Enrich; log2)
2018145
(v2.0)		Rdx19684
465/1720.9181300/1720.6832155/1723.3619291/1722.073954/1720.3784307/1720.2352
SPR_Methy_Kobayashi_5KaroundTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level
2018145
(v2.0)		Rdx19684
33.85711130.5
SPR_Methy_Kobayashi_2KaroundTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level
2018145
(v2.0)		Rdx19684
8.25817610.87
SOLiD_OocyteTo4C_FPKM_gene_guided N/A
SOLiD_Illumina_Oo_1C_Sperm_FPKM_gene_guided N/A
SOLiD_Partheno1C_FPKM_gene_guided N/A
SOLiD_Illumina_Oo_p1C_Sperm_FPKM_gene_guided N/A
SOLiD_Partheno4C_FPKM_gene_guided N/A
Illumina_Oo_2C_FPKM_gene_guided N/A
SOLiD_SC_Oo_REPLICA_FPKM_gene_guided N/A
NIA60mer
DBTMEEArray_Feature_NumberOligo_Parent_CloneUnigeneGeneEntrezU_ClusterNAP_ClusterGene_U/NAPTIGRSwissProtESTOo1C2C4C8CMorulaBlastocyst
0017627
(v1.0)		8319H3063F08-3Mm.7051Rdx19684
U010482NAP121370-001Rdx;TC904556,TC874826P26043U,F,23.78333.78223.13722.95222.45392.86552.9613
0017627
(v1.0)		11367H3114B04-3Rdx19684
U010482NAP121370-001Rdx;TC904556,TC874826P26043U,F,24.33023.94033.07233.3022.72723.09543.0737
MOE430 N/A
Agilent44K N/A
Proteome N/A