DBTMEE
Database of Transcriptome in Mouse Early Embryos


Gene Search:

DBTMEE:2018537
GeneRpl10a
SynonymsCsA-19
Nedd6
Descriptionribosomal protein L10A
LocusNM_011287 UCSC: chr17:28465416-28467978(+) OLP: chr17:28465416-28467978(+)
DB links


Entrez 19896
MGI 1343877
Ensembl ENSMUSG00000037805
Vega OTTMUSG00000023382
Featureprotein-coding
GO_BP
GO_MF
GO_CC
KEGG
Ver2_FPKM
Log10 (FPKM+1)
2.942
SPR
1.555
Oo
0.937
1C
2.399
2C
2.94
4C
3.691
ESC
2.711
MEF
0.849
p1C
2.849
p4C
3.745
iPSC
DBTMEEGeneRefSeqEntrezSPR_FPKMOo_FPKM1C_FPKM2C_FPKM4C_FPKMESC_FPKMMEF_FPKMp1C_FPKMp4C_FPKMiPSC_FPKM
2018537
(v2.0)		Rpl10aNM_01128719896
873.68334.90247.64749249.698870.8984907.54512.536.06065705.4175561.67
SPR_Histone_Erkek_5KaroundTSS
Enrichment of Histone Variant and Modification (+/- 5Kb from TSS)
0.145
H3.3
Rep.1
-0.514
H3.3
Rep.2
1.398
H3K4me3
Rep.1
0.605
H3K4me3
Rep.2
-1.397
H3K27me3
Rep.1
-0.743
H3K27me3
Rep.2
DBTMEEGeneEntrezH3.3_1_ChIP/InputH3.3_1(Enrich; log2)H3.3_2_ChIP/InputH3.3_2(Enrich; log2)H3K4me3_1_ChIP/InputH3K4me3_1(Enrich; log2)H3K4me3_2_ChIP/InputH3K4me3_2(Enrich; log2)H3K27me3_1_ChIP/InputH3K27me3_1(Enrich; log2)H3K27me3_2_ChIP/InputH3K27me3_2(Enrich; log2)
2018537
(v2.0)		Rpl10a19896
824/5220.1455396/522-0.5136115/5221.398316/5220.604847/522-1.3966472/522-0.7428
SPR_Histone_Erkek_2KaroundTSS
Enrichment of Histone Variant and Modification (+/- 2Kb from TSS)
0.301
H3.3
Rep.1
-0.386
H3.3
Rep.2
2.278
H3K4me3
Rep.1
1.523
H3K4me3
Rep.2
-2.131
H3K27me3
Rep.1
-1.521
H3K27me3
Rep.2
DBTMEEGeneEntrezH3.3_1_ChIP/InputH3.3_1(Enrich; log2)H3.3_2_ChIP/InputH3.3_2(Enrich; log2)H3K4me3_1_ChIP/InputH3K4me3_1(Enrich; log2)H3K4me3_2_ChIP/InputH3K4me3_2(Enrich; log2)H3K27me3_1_ChIP/InputH3K27me3_1(Enrich; log2)H3K27me3_2_ChIP/InputH3K27me3_2(Enrich; log2)
2018537
(v2.0)		Rpl10a19896
410/2330.3013193/233-0.38697/2332.2783268/2331.523112/233-2.1315122/233-1.5212
SPR_Methy_Kobayashi_5KaroundTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level
2018537
(v2.0)		Rpl10a19896
77.406919240.32
SPR_Methy_Kobayashi_2KaroundTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level
2018537
(v2.0)		Rpl10a19896
23.3610023.36
SOLiD_OocyteTo4C_FPKM_gene_guided N/A
SOLiD_Illumina_Oo_1C_Sperm_FPKM_gene_guided N/A
SOLiD_Partheno1C_FPKM_gene_guided N/A
SOLiD_Illumina_Oo_p1C_Sperm_FPKM_gene_guided N/A
SOLiD_Partheno4C_FPKM_gene_guided N/A
Illumina_Oo_2C_FPKM_gene_guided N/A
SOLiD_SC_Oo_REPLICA_FPKM_gene_guided N/A
NIA60mer
DBTMEEArray_Feature_NumberOligo_Parent_CloneUnigeneGeneEntrezU_ClusterNAP_ClusterGene_U/NAPTIGRSwissProtESTOo1C2C4C8CMorulaBlastocyst
0018010
(v1.0)		21007L0824F08-3Mm.2424Rpl10a19896
Rpl10aTC8136863.27573.29663.68794.16534.1034.35394.3245
MOE430 N/A
Agilent44K N/A
Proteome N/A