DBTMEE

DBTMEE
Database of Transcriptome in Mouse Early Embryos

DBTMEE:2018583

Gene

Rpl7

Synonyms

Rpl7a
Surf-3

Description

ribosomal protein L7

Locus

NM_011291 UCSC: chr1:16091376-16094514(-) OLP: chr1:16091376-16094514(-)

DB links

Entrez 19989
MGI 98073
Ensembl ENSMUSG00000043716
Vega OTTMUSG00000016936

Feature

protein-coding

GO_BP

3 Terms

GO_MF

6 Terms

GO_CC

5 Terms

KEGG

1 Terms

DBTMEE	Gene	RefSeq	Entrez	SPR_FPKM	Oo_FPKM	1C_FPKM	2C_FPKM	4C_FPKM	ESC_FPKM	MEF_FPKM	p1C_FPKM	p4C_FPKM	iPSC_FPKM
2018583 (v2.0)	Rpl7	NM_011291	19989	789.681	69.7201	7.72494	459.997	1883.45	5591.16	980.619	7.21987	1750.37	6408.49

SPR_Histone_Erkek_5KaroundTSS

DBTMEE	Gene	Entrez	H3.3_1_ChIP/Input	H3.3_1(Enrich; log2)	H3.3_2_ChIP/Input	H3.3_2(Enrich; log2)	H3K4me3_1_ChIP/Input	H3K4me3_1(Enrich; log2)	H3K4me3_2_ChIP/Input	H3K4me3_2(Enrich; log2)	H3K27me3_1_ChIP/Input	H3K27me3_1(Enrich; log2)	H3K27me3_2_ChIP/Input	H3K27me3_2(Enrich; log2)
2018583 (v2.0)	Rpl7	19989	920/441	0.547	670/441	0.4862	1291/441	5.1127	3272/441	4.2148	86/441	-0.2975	546/441	-0.2905

SPR_Histone_Erkek_2KaroundTSS

DBTMEE	Gene	Entrez	H3.3_1_ChIP/Input	H3.3_1(Enrich; log2)	H3.3_2_ChIP/Input	H3.3_2(Enrich; log2)	H3K4me3_1_ChIP/Input	H3K4me3_1(Enrich; log2)	H3K4me3_2_ChIP/Input	H3K4me3_2(Enrich; log2)	H3K27me3_1_ChIP/Input	H3K27me3_1(Enrich; log2)	H3K27me3_2_ChIP/Input	H3K27me3_2(Enrich; log2)
2018583 (v2.0)	Rpl7	19989	555/182	1.0915	345/182	0.8031	960/182	5.9085	2049/182	4.8051	40/182	-0.1251	335/182	0.2795

SPR_Methy_Kobayashi_5KaroundTSS

DBTMEE	Gene	Entrez	Total_mC_levels	Number_of_mCs	Averaged_Methylation_level
2018583 (v2.0)	Rpl7	19989	73.8917	191	38.69

SPR_Methy_Kobayashi_2KaroundTSS

DBTMEE	Gene	Entrez	Total_mC_levels	Number_of_mCs	Averaged_Methylation_level
2018583 (v2.0)	Rpl7	19989	27.1887	137	19.85

SOLiD_OocyteTo4C_FPKM_gene_guided

N/A

SOLiD_Illumina_Oo_1C_Sperm_FPKM_gene_guided

N/A

SOLiD_Partheno1C_FPKM_gene_guided

N/A

SOLiD_Illumina_Oo_p1C_Sperm_FPKM_gene_guided

N/A

SOLiD_Partheno4C_FPKM_gene_guided

N/A

Illumina_Oo_2C_FPKM_gene_guided

N/A

SOLiD_SC_Oo_REPLICA_FPKM_gene_guided

N/A

DBTMEE	Array_Feature_Number	Oligo_Parent_Clone	Unigene	Gene	Entrez	U_Cluster	NAP_Cluster	Gene_U/NAP	TIGR	SwissProt	EST	Oo	1C	2C	4C	8C	Morula	Blastocyst
0018055 (v1.0)	1323	C0199C02-3	Mm.37835	Rpl7	19989							3.3748	3.3365	3.8089	4.494	4.9015	4.8614	4.8496
0018055 (v1.0)	19320	L0265G06-3	Mm.37835	Rpl7	19989	U021140	NAP099942-001		TC897011,TC897010,TC897004,TC897001,TC896992	P14148	U,F,2	2.9102	3.0077	3.8782	4.4257	4.6094	4.6837	4.6225

N/A

N/A

N/A