DBTMEE
Database of Transcriptome in Mouse Early Embryos


Gene Search:

DBTMEE:2018602
GeneRprd1a
Synonyms
Descriptionregulation of nuclear pre-mRNA domain containing 1A
LocusNM_144861 UCSC: chr18:24643463-24688705(-) OLP: chr18:24643463-24688705(-)
DB links


Entrez 225283
MGI 2385066
Ensembl ENSMUSG00000040446
Featureprotein-coding
GO_BP
  •   1 Terms
      dephosphorylation of RNA polymerase II C-terminal domain (GO:0070940)
GO_MF
GO_CC
  •   1 Terms
      DNA-directed RNA polymerase II, holoenzyme (GO:0016591)
KEGG
Ver2_FPKM
DBTMEEGeneRefSeqEntrezSPR_FPKMOo_FPKM1C_FPKM2C_FPKM4C_FPKMESC_FPKMMEF_FPKMp1C_FPKMp4C_FPKMiPSC_FPKM
2018602
(v2.0)		Rprd1aNM_144861225283
10.40169.9332216.242460.557947.798113.08187.5295814.387141.67315.1135
SPR_Histone_Erkek_5KaroundTSS
DBTMEEGeneEntrezH3.3_1_ChIP/InputH3.3_1(Enrich; log2)H3.3_2_ChIP/InputH3.3_2(Enrich; log2)H3K4me3_1_ChIP/InputH3K4me3_1(Enrich; log2)H3K4me3_2_ChIP/InputH3K4me3_2(Enrich; log2)H3K27me3_1_ChIP/InputH3K27me3_1(Enrich; log2)H3K27me3_2_ChIP/InputH3K27me3_2(Enrich; log2)
2018602
(v2.0)		Rprd1a225283
467/2440.4222290/2440.132568/2441.7088200/2441.036817/244-1.7274122/244-1.5874
SPR_Histone_Erkek_2KaroundTSS
DBTMEEGeneEntrezH3.3_1_ChIP/InputH3.3_1(Enrich; log2)H3.3_2_ChIP/InputH3.3_2(Enrich; log2)H3K4me3_1_ChIP/InputH3K4me3_1(Enrich; log2)H3K4me3_2_ChIP/InputH3K4me3_2(Enrich; log2)H3K27me3_1_ChIP/InputH3K27me3_1(Enrich; log2)H3K27me3_2_ChIP/InputH3K27me3_2(Enrich; log2)
2018602
(v2.0)		Rprd1a225283
331/1470.6546170/1470.092967/1472.3744195/1471.721814/147-1.275384/147-1.3907
SPR_Methy_Kobayashi_5KaroundTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level
2018602
(v2.0)		Rprd1a225283
45.77413134.94
SPR_Methy_Kobayashi_2KaroundTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level
2018602
(v2.0)		Rprd1a225283
18.014610217.66
SOLiD_OocyteTo4C_FPKM_gene_guided N/A
SOLiD_Illumina_Oo_1C_Sperm_FPKM_gene_guided N/A
SOLiD_Partheno1C_FPKM_gene_guided N/A
SOLiD_Illumina_Oo_p1C_Sperm_FPKM_gene_guided N/A
SOLiD_Partheno4C_FPKM_gene_guided N/A
Illumina_Oo_2C_FPKM_gene_guided N/A
SOLiD_SC_Oo_REPLICA_FPKM_gene_guided N/A
NIA60mer N/A
MOE430 N/A
Agilent44K N/A
Proteome N/A