DBTMEE
Database of Transcriptome in Mouse Early Embryos


Gene Search:

DBTMEE:2018650
GeneRps6kb1
Synonymsp70/85s6k
p70s6k
S6K1
Descriptionribosomal protein S6 kinase, polypeptide 1
LocusNM_001114334 UCSC: chr11:86312513-86358309(-) OLP: chr11:86312513-86358309(-)
NM_028259 UCSC: chr11:86327485-86358309(-) OLP: chr11:86327485-86358309(-)
DB links


Entrez 72508
MGI 1270849
Ensembl ENSMUSG00000020516
Vega OTTMUSG00000001198
Featureprotein-coding
GO_BP
GO_MF
GO_CC
KEGG
Ver2_FPKM
Log10 (FPKM+1)
0.779
SPR
0.808
Oo
1.03
1C
1.133
2C
1.131
4C
0.968
ESC
1.313
MEF
0.997
p1C
1.099
p4C
0.958
iPSC
DBTMEEGeneRefSeqEntrezSPR_FPKMOo_FPKM1C_FPKM2C_FPKM4C_FPKMESC_FPKMMEF_FPKMp1C_FPKMp4C_FPKMiPSC_FPKM
2018650
(v2.0)		Rps6kb1NM_001114334,NM_02825972508
5.00615.421259.7207312.567712.51918.2793619.53568.9375511.55868.07355
SPR_Histone_Erkek_5KaroundTSS
Enrichment of Histone Variant and Modification (+/- 5Kb from TSS)
0.156
H3.3
Rep.1
0.186
H3.3
Rep.2
2.361
H3K4me3
Rep.1
1.179
H3K4me3
Rep.2
-2.253
H3K27me3
Rep.1
-2.345
H3K27me3
Rep.2
DBTMEEGeneEntrezH3.3_1_ChIP/InputH3.3_1(Enrich; log2)H3.3_2_ChIP/InputH3.3_2(Enrich; log2)H3K4me3_1_ChIP/InputH3K4me3_1(Enrich; log2)H3K4me3_2_ChIP/InputH3K4me3_2(Enrich; log2)H3K27me3_1_ChIP/InputH3K27me3_1(Enrich; log2)H3K27me3_2_ChIP/InputH3K27me3_2(Enrich; log2)
2018650
(v2.0)		Rps6kb172508
593/3730.1556460/3730.1858162/3732.3606337/3731.179418/373-2.2533110/373-2.3452
SPR_Histone_Erkek_2KaroundTSS
Enrichment of Histone Variant and Modification (+/- 2Kb from TSS)
0.322
H3.3
Rep.1
0.316
H3.3
Rep.2
3.43
H3K4me3
Rep.1
2.217
H3K4me3
Rep.2
-2.562
H3K27me3
Rep.1
-2.342
H3K27me3
Rep.2
DBTMEEGeneEntrezH3.3_1_ChIP/InputH3.3_1(Enrich; log2)H3.3_2_ChIP/InputH3.3_2(Enrich; log2)H3K4me3_1_ChIP/InputH3K4me3_1(Enrich; log2)H3K4me3_2_ChIP/InputH3K4me3_2(Enrich; log2)H3K27me3_1_ChIP/InputH3K27me3_1(Enrich; log2)H3K27me3_2_ChIP/InputH3K27me3_2(Enrich; log2)
2018650
(v2.0)		Rps6kb172508
300/1680.322227/1680.3163159/1683.4301314/1682.21676/168-2.562549/168-2.3416
SPR_Methy_Kobayashi_5KaroundTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level
2018650
(v2.0)		Rps6kb172508
47.191311242.14
SPR_Methy_Kobayashi_2KaroundTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level
2018650
(v2.0)		Rps6kb172508
11.13347315.25
SOLiD_OocyteTo4C_FPKM_gene_guided N/A
SOLiD_Illumina_Oo_1C_Sperm_FPKM_gene_guided N/A
SOLiD_Partheno1C_FPKM_gene_guided N/A
SOLiD_Illumina_Oo_p1C_Sperm_FPKM_gene_guided N/A
SOLiD_Partheno4C_FPKM_gene_guided N/A
Illumina_Oo_2C_FPKM_gene_guided N/A
SOLiD_SC_Oo_REPLICA_FPKM_gene_guided N/A
NIA60mer N/A
MOE430 N/A
Agilent44K N/A
Proteome N/A