DBTMEE

DBTMEE
Database of Transcriptome in Mouse Early Embryos

DBTMEE:2018878

Gene

Scamp3

Synonyms

Sc3

Description

secretory carrier membrane protein 3

Locus

NM_011886 UCSC: chr3:88981407-88986692(+) OLP: chr3:88981407-88986692(+)

DB links

Entrez 24045
MGI 1346346
Ensembl ENSMUSG00000028049
Vega OTTMUSG00000029730

Feature

protein-coding

GO_BP

5 Terms

GO_MF

GO_CC

6 Terms

KEGG

DBTMEE	Gene	RefSeq	Entrez	SPR_FPKM	Oo_FPKM	1C_FPKM	2C_FPKM	4C_FPKM	ESC_FPKM	MEF_FPKM	p1C_FPKM	p4C_FPKM	iPSC_FPKM
2018878 (v2.0)	Scamp3	NM_011886	24045	34.6906	40.4398	24.6466	19.1977	19.3819	36.667	23.3052	29.9444	21.4865	39.074

SPR_Histone_Erkek_5KaroundTSS

DBTMEE	Gene	Entrez	H3.3_1_ChIP/Input	H3.3_1(Enrich; log2)	H3.3_2_ChIP/Input	H3.3_2(Enrich; log2)	H3K4me3_1_ChIP/Input	H3K4me3_1(Enrich; log2)	H3K4me3_2_ChIP/Input	H3K4me3_2(Enrich; log2)	H3K27me3_1_ChIP/Input	H3K27me3_1(Enrich; log2)	H3K27me3_2_ChIP/Input	H3K27me3_2(Enrich; log2)
2018878 (v2.0)	Scamp3	24045	738/578	-0.16	407/578	-0.6209	67/578	0.4836	167/578	-0.4576	20/578	-2.7352	181/578	-2.2649

SPR_Histone_Erkek_2KaroundTSS

DBTMEE	Gene	Entrez	H3.3_1_ChIP/Input	H3.3_1(Enrich; log2)	H3.3_2_ChIP/Input	H3.3_2(Enrich; log2)	H3K4me3_1_ChIP/Input	H3K4me3_1(Enrich; log2)	H3K4me3_2_ChIP/Input	H3K4me3_2(Enrich; log2)	H3K27me3_1_ChIP/Input	H3K27me3_1(Enrich; log2)	H3K27me3_2_ChIP/Input	H3K27me3_2(Enrich; log2)
2018878 (v2.0)	Scamp3	24045	290/242	-0.2506	164/242	-0.674	60/242	1.5424	142/242	0.5574	13/242	-2.0783	53/242	-2.7556

SPR_Methy_Kobayashi_5KaroundTSS

DBTMEE	Gene	Entrez	Total_mC_levels	Number_of_mCs	Averaged_Methylation_level
2018878 (v2.0)	Scamp3	24045	114.234	165	69.23

SPR_Methy_Kobayashi_2KaroundTSS

DBTMEE	Gene	Entrez	Total_mC_levels	Number_of_mCs	Averaged_Methylation_level
2018878 (v2.0)	Scamp3	24045	43.4586	87	49.95

SOLiD_OocyteTo4C_FPKM_gene_guided

N/A

SOLiD_Illumina_Oo_1C_Sperm_FPKM_gene_guided

N/A

SOLiD_Partheno1C_FPKM_gene_guided

N/A

SOLiD_Illumina_Oo_p1C_Sperm_FPKM_gene_guided

N/A

SOLiD_Partheno4C_FPKM_gene_guided

N/A

Illumina_Oo_2C_FPKM_gene_guided

N/A

SOLiD_SC_Oo_REPLICA_FPKM_gene_guided

N/A

DBTMEE	Array_Feature_Number	Oligo_Parent_Clone	Unigene	Gene	Entrez	U_Cluster	NAP_Cluster	Gene_U/NAP	TIGR	SwissProt	EST	Oo	1C	2C	4C	8C	Morula	Blastocyst
0018344 (v1.0)	777	C0143A01-3	Mm.3230	Scamp3	24045	U003454	NAP010081-001	Scamp3;	TC904320	O35609		3.891	3.9052	3.9194	4.3676	4.1637	4.2835	4.3021
0018344 (v1.0)	986	C0170H12-3	Mm.3230	Scamp3	24045	U003454	NAP010081-001	Scamp3;	TC904320	O35609		3.8965	3.9102	3.9189	4.3697	4.1796	4.2847	4.2851

N/A

N/A

N/A