DBTMEE
Database of Transcriptome in Mouse Early Embryos


Gene Search:

DBTMEE:2019027
GeneSec22a
SynonymsSec22l2
DescriptionSEC22 vesicle trafficking protein homolog A (S. cerevisiae)
LocusNM_133704 UCSC: chr16:35311217-35364004(-) OLP: chr16:35311217-35364004(-)
DB links


Entrez 317717
MGI 2447876
Ensembl ENSMUSG00000034473
Vega OTTMUSG00000025485
Featureprotein-coding
GO_BP
GO_MF
GO_CC
KEGG
Ver2_FPKM
Log10 (FPKM+1)
0.63
SPR
1.615
Oo
1.586
1C
0.75
2C
0.777
4C
0.909
ESC
0.839
MEF
1.425
p1C
0.846
p4C
0.985
iPSC
DBTMEEGeneRefSeqEntrezSPR_FPKMOo_FPKM1C_FPKM2C_FPKM4C_FPKMESC_FPKMMEF_FPKMp1C_FPKMp4C_FPKMiPSC_FPKM
2019027
(v2.0)		Sec22aNM_133704317717
3.2637240.214737.53194.617714.989947.102325.906725.58396.011378.66567
SPR_Histone_Erkek_5KaroundTSS
Enrichment of Histone Variant and Modification (+/- 5Kb from TSS)
0.142
H3.3
Rep.1
-0.039
H3.3
Rep.2
1.97
H3K4me3
Rep.1
1.488
H3K4me3
Rep.2
0.648
H3K27me3
Rep.1
0.455
H3K27me3
Rep.2
DBTMEEGeneEntrezH3.3_1_ChIP/InputH3.3_1(Enrich; log2)H3.3_2_ChIP/InputH3.3_2(Enrich; log2)H3K4me3_1_ChIP/InputH3K4me3_1(Enrich; log2)H3K4me3_2_ChIP/InputH3K4me3_2(Enrich; log2)H3K27me3_1_ChIP/InputH3K27me3_1(Enrich; log2)H3K27me3_2_ChIP/InputH3K27me3_2(Enrich; log2)
2019027
(v2.0)		Sec22a317717
688/4370.1416461/437-0.039144/4371.97489/4371.4881165/4370.6477908/4370.4548
SPR_Histone_Erkek_2KaroundTSS
Enrichment of Histone Variant and Modification (+/- 2Kb from TSS)
0.352
H3.3
Rep.1
0.104
H3.3
Rep.2
3.193
H3K4me3
Rep.1
2.711
H3K4me3
Rep.2
0.617
H3K27me3
Rep.1
0.288
H3K27me3
Rep.2
DBTMEEGeneEntrezH3.3_1_ChIP/InputH3.3_1(Enrich; log2)H3.3_2_ChIP/InputH3.3_2(Enrich; log2)H3K4me3_1_ChIP/InputH3K4me3_1(Enrich; log2)H3K4me3_2_ChIP/InputH3K4me3_2(Enrich; log2)H3K27me3_1_ChIP/InputH3K27me3_1(Enrich; log2)H3K27me3_2_ChIP/InputH3K27me3_2(Enrich; log2)
2019027
(v2.0)		Sec22a317717
319/1750.3516204/1750.1044140/1753.1927461/1752.711265/1750.617324/1750.2878
SPR_Methy_Kobayashi_5KaroundTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level
2019027
(v2.0)		Sec22a317717
66.636313449.73
SPR_Methy_Kobayashi_2KaroundTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level
2019027
(v2.0)		Sec22a317717
16.35458020.44
SOLiD_OocyteTo4C_FPKM_gene_guided N/A
SOLiD_Illumina_Oo_1C_Sperm_FPKM_gene_guided N/A
SOLiD_Partheno1C_FPKM_gene_guided N/A
SOLiD_Illumina_Oo_p1C_Sperm_FPKM_gene_guided N/A
SOLiD_Partheno4C_FPKM_gene_guided N/A
Illumina_Oo_2C_FPKM_gene_guided N/A
SOLiD_SC_Oo_REPLICA_FPKM_gene_guided N/A
NIA60mer N/A
MOE430 N/A
Agilent44K N/A
Proteome N/A